myRT

myRT report for GCA_003698545.1_ASM369854v1

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Seq: MCMC01000001.1 (1345837 bp)
Overview 1 RT 1: 1340009-1345538 bp Neighborhood of RT #1 [1340009, 1345834] CHD CHD RVT-GII GIIM DUF772 Feature: gene Location: 1340009-1341553 bp Feature: domain Description: CHD Location: 1340225-1340639 bp Feature: domain Description: CHD Location: 1 340225-1 340639 bp Feature: domain Description: CHD Location: 1340867-1341356 bp Feature: domain Description: CHD Location: 1 340867-1 341 356 bp Feature: gene Location: 1342637-1342816 bp Feature: gene Location: 1343548-1344816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1343761-1344418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 343761 -1 34441 8 bp Feature: domain Description: GIIM Note: maturase Location: 1344496-1344718 bp Feature: domain Description: GIIM Note: maturase Location: 1 344496-1 34471 8 bp Feature: gene Location: 1345205-1345834 bp Feature: domain Description: DUF772 Location: 1345343-1345538 bp Feature: domain Description: DUF772 Location: 1 345343-1 345538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: MCMC01000006.1 (447615 bp)
Overview 1 RT 1: 75830-79440 bp Neighborhood of RT #1 [75830, 79454] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 75830-76054 bp Feature: gene Location: 76271-76648 bp Feature: gene Location: 77093-78202 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 77270-77954 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 772 70-77954 bp Feature: gene Location: 78475-78831 bp Feature: domain Description: Avd_like Location: 78502-78805 bp Feature: domain Description: Avd_like Location: 78502 -78805 bp Feature: gene Location: 78870-79454 bp Feature: domain Description: DUF1566 Location: 79116-79440 bp Feature: domain Description: DUF1566 Location: 79116-79440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: MCMC01000007.1 (416518 bp)
Overview 1 RT 1: 329480-339786 bp 2 RT 2: 356045-364877 bp Neighborhood of RT #1 [329480, 339788] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #2 [356045, 364906] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 329480-330601 bp Feature: domain Description: COG3177 Location: 329498-330590 bp Feature: domain Description: COG3 177 Location: 3 29498-3 3 0590 bp Feature: gene Location: 330860-330997 bp Feature: gene Location: 331325-333010 bp Feature: domain Description: RVT_N Location: 331382-331622 bp Feature: domain Description: RVT_N Location: 3 3 13 82-3 3 1622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331670-332306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 1670-3 3 23 06 bp Feature: domain Description: GIIM Note: maturase Location: 332360-332591 bp Feature: domain Description: GIIM Note: maturase Location: 3 3 23 60-3 3 2591 bp Feature: domain Description: HNH Note: nucleases Location: 332843-332981 bp Feature: domain Description: HNH Note: nucleases Location: 3 3 2843 -3 3 2981 bp Feature: gene Location: 334091-337828 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 334199-334856 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 3 3 4199-3 3 4856 bp Feature: domain Description: PRK09776 Location: 335069-335540 bp Feature: domain Description: PRK09776 Location: 3 3 5069-3 3 5540 bp Feature: domain Description: PAS Location: 335597-336122 bp Feature: domain Description: PAS Location: 3 3 5597-3 3 6122 bp Feature: domain Description: PRK10060 Location: 336131-337778 bp Feature: domain Description: PRK10060 Location: 3 3 613 1-3 3 7778 bp Feature: gene Location: 337935-339788 bp Feature: domain Description: PRK05658 Location: 337947-339786 bp Feature: domain Description: PRK05658 Location: 3 3 7947-3 3 9786 bp Feature: gene Location: 356045-357259 bp Feature: domain Description: PRK10770 Location: 356057-357251 bp Feature: domain Description: PRK10770 Location: 3 56057-3 57251 bp Feature: gene Location: 357318-360101 bp Feature: domain Description: LptD Location: 357513-360087 bp Feature: domain Description: LptD Location: 3 57513 -3 60087 bp Feature: gene Location: 360234-361946 bp Feature: domain Description: RVT_N Location: 360291-360534 bp Feature: domain Description: RVT_N Location: 3 60291-3 6053 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 360579-361215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 60579-3 61215 bp Feature: domain Description: YkfC Location: 361422-361575 bp Feature: domain Description: YkfC Location: 3 61422-3 61575 bp Feature: domain Description: HNH Note: nucleases Location: 361752-361890 bp Feature: domain Description: HNH Note: nucleases Location: 3 61752-3 61890 bp Feature: gene Location: 363219-364235 bp Feature: domain Description: COG3178 Location: 363222-364221 bp Feature: domain Description: COG3 178 Location: 3 63 222-3 64221 bp Feature: gene Location: 364232-364906 bp Feature: domain Description: NTP_transferase_like_1 Location: 364238-364877 bp Feature: domain Description: NTP_transferase_like_1 Location: 3 6423 8-3 64877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT