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myRT report for GCA_003698565.1_ASM369856v1
Download annotations/find similar RTs
Seq:
MCMD01000021.1 (97175 bp)
Overview
1
RT 1: 1-8438 bp
2
RT 2: 23714-33520 bp
Neighborhood of RT #1 [1, 8440]
RVT_N
RVT-GII
GIIM
HNH
PBP2_BvgS_HisK_like
PRK09776
PAS
PRK10060
PRK05658
Neighborhood of RT #2 [23714, 33549]
pdxA
PRK10770
RVT_N
RVT-GII
YkfC
HNH
LptD
COG3178
NTP_transferase_like_1
Feature: gene
Location: 1-1662 bp
Feature: domain
Description: RVT_N
Location: 58-298 bp
Feature: domain
Description: RVT_N
Location: 58-298 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 346-982 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 346-982 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 1036-1267 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 1 036-1 267 bp
Feature: domain
Description: HNH
Note: nucleases
Location: 1537-1657 bp
Feature: domain
Description: HNH
Note: nucleases
Location: 1 537-1 657 bp
Feature: gene
Location: 2743-6480 bp
Feature: domain
Description: PBP2_BvgS_HisK_like
Location: 2851-3508 bp
Feature: domain
Description: PBP2_BvgS_HisK_like
Location: 2851 -3508 bp
Feature: domain
Description: PRK09776
Location: 3721-4192 bp
Feature: domain
Description: PRK09776
Location: 3721 -41 92 bp
Feature: domain
Description: PAS
Location: 4249-4774 bp
Feature: domain
Description: PAS
Location: 4249-4774 bp
Feature: domain
Description: PRK10060
Location: 4786-6430 bp
Feature: domain
Description: PRK1 0060
Location: 4786-6430 bp
Feature: gene
Location: 6587-8440 bp
Feature: domain
Description: PRK05658
Location: 6599-8438 bp
Feature: domain
Description: PRK05658
Location: 6599-8438 bp
Feature: gene
Location: 23714-24700 bp
Feature: domain
Description: pdxA
Location: 23723-24695 bp
Feature: domain
Description: pdxA
Location: 23723-24695 bp
Feature: gene
Location: 24697-25911 bp
Feature: domain
Description: PRK10770
Location: 24709-25903 bp
Feature: domain
Description: PRK1 0770
Location: 24709-25903 bp
Feature: gene
Location: 25970-30589 bp
Feature: domain
Description: RVT_N
Location: 26027-26270 bp
Feature: domain
Description: RVT_N
Location: 26027-26270 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 26315-26951 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 2631 5-26951 bp
Feature: domain
Description: YkfC
Location: 27161-27311 bp
Feature: domain
Description: YkfC
Location: 271 61 -2731 1 bp
Feature: domain
Description: HNH
Note: nucleases
Location: 27488-27626 bp
Feature: domain
Description: HNH
Note: nucleases
Location: 27488-27626 bp
Feature: domain
Description: LptD
Location: 28010-30575 bp
Feature: domain
Description: LptD
Location: 2801 0-30575 bp
Feature: gene
Location: 31862-32878 bp
Feature: domain
Description: COG3178
Location: 31865-32864 bp
Feature: domain
Description: COG31 78
Location: 31 865-32864 bp
Feature: gene
Location: 32875-33549 bp
Feature: domain
Description: NTP_transferase_like_1
Location: 32881-33520 bp
Feature: domain
Description: NTP_transferase_like_1
Location: 32881 -33520 bp
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