myRT

myRT report for GCA_003700235.1_ASM370023v1

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Seq: RBQS01000328.1 (1865 bp)
Overview 1 RT 1: 3-1700 bp Neighborhood of RT #1 [3, 1807] RVT-GII GIIM Feature: gene Location: 3-158 bp Feature: gene Location: 183-542 bp Feature: gene Location: 539-1807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743-1400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743-1 400 bp Feature: domain Description: GIIM Note: maturase Location: 1478-1700 bp Feature: domain Description: GIIM Note: maturase Location: 1 478-1 700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RBQS01000364.1 (48207 bp)
Overview 1 RT 1: 42935-48186 bp Neighborhood of RT #1 [42935, 48206] ComA-like_MBL-fold RVT-Retrons COG3666 DDE_Tnp_1_6 Feature: gene Location: 42935-44353 bp Feature: domain Description: ComA-like_MBL-fold Location: 43484-43970 bp Feature: domain Description: ComA-like_MBL-fold Location: 43484-43970 bp Feature: gene Location: 44538-44672 bp Feature: gene Location: 44797-46506 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 44950-45547 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 44950-45547 bp Feature: gene Location: 46592-46753 bp Feature: gene Location: 47004-48206 bp Feature: domain Description: COG3666 Location: 47046-47487 bp Feature: domain Description: COG3666 Location: 47046-47487 bp Feature: domain Description: DDE_Tnp_1_6 Location: 47964-48186 bp Feature: domain Description: DDE_Tnp_1_6 Location: 47964-48186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ComA-like_MBL-fold (cd07731), RVT-Retrons, COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751)

Seq: RBQS01000330.1 (1837 bp)
Overview 1 RT 1: 90-1323 bp Neighborhood of RT #1 [90, 1457] RVT-GII GIIM Feature: gene Location: 90-1457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 423-1038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 423 -103 8 bp Feature: domain Description: GIIM Note: maturase Location: 1095-1323 bp Feature: domain Description: GIIM Note: maturase Location: 1095-13 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RBQS01000196.1 (1771 bp)
Overview 1 RT 1: 2-1768 bp Neighborhood of RT #1 [2, 1768] RVT-GII GIIM Feature: gene Location: 2-1270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245-860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24 5-860 bp Feature: domain Description: GIIM Note: maturase Location: 905-1115 bp Feature: domain Description: GIIM Note: maturase Location: 905-1115 bp Feature: gene Location: 1493-1768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RBQS01000107.1 (8327 bp)
Overview 1 RT 1: 1238-7387 bp Neighborhood of RT #1 [1238, 7422] modC_ABC Top1 RVT-GII Intron_maturas2 HNHc DUF2625 Feature: gene Location: 1238-2326 bp Feature: domain Description: modC_ABC Location: 1253-2318 bp Feature: domain Description: modC_ABC Location: 125 3-2318 bp Feature: gene Location: 2415-3470 bp Feature: domain Description: Top1 Location: 2448-3462 bp Feature: domain Description: Top1 Location: 2448-3462 bp Feature: gene Location: 4301-6136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4562-5375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45 62-5 375 bp Feature: domain Description: Intron_maturas2 Location: 5471-5786 bp Feature: domain Description: Intron_maturas2 Location: 5 471-5 786 bp Feature: domain Description: HNHc Note: nucleases Location: 5909-6074 bp Feature: domain Description: HNHc Note: nucleases Location: 5 909-6074 bp Feature: gene Location: 6376-6567 bp Feature: gene Location: 6574-7422 bp Feature: domain Description: DUF2625 Location: 6799-7387 bp Feature: domain Description: DUF2625 Location: 6799-7387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT modC_ABC (TIGR02142), Top1 (COG3569), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF2625 (pfam10946)

Seq: RBQS01000441.1 (4710 bp)
Overview 1 RT 1: 1550-3822 bp Neighborhood of RT #1 [1550, 4574] UvrD_C RVT-UG9 Feature: gene Location: 1550-2494 bp Feature: gene Location: 2855-3445 bp Feature: domain Description: UvrD_C Location: 3179-3374 bp Feature: domain Description: UvrD_C Location: 3179-3374 bp Feature: gene Location: 3543-4574 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 3549-3822 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 3549-3822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrD_C (pfam13361), RVT-UG9