myRT

myRT report for GCA_003700625.1_ASM370062v1

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Seq: RBPO01000099.1 (27342 bp)
Overview 1 RT 1: 419-3356 bp Neighborhood of RT #1 [419, 3356] RVT-Retrons Trypsin_2 PRK13877 Feature: gene Location: 419-2095 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 566-1187 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 566-1 1 87 bp Feature: domain Description: Trypsin_2 Location: 1580-2000 bp Feature: domain Description: Trypsin_2 Location: 1 580-2000 bp Feature: gene Location: 2629-3150 bp Feature: domain Description: PRK13877 Location: 2791-3106 bp Feature: domain Description: PRK1 3877 Location: 2791 -31 06 bp Feature: gene Location: 3222-3356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Trypsin_2 (pfam13365), PRK13877 (conjugal transfer transcriptional regulator TraJ)

Seq: RBPO01000067.1 (35863 bp)
Overview 1 RT 1: 24674-30155 bp Neighborhood of RT #1 [24674, 30193] PRK14975 RVT-UG9 COG3666 DDE_Tnp_1_6 Feature: gene Location: 24674-24817 bp Feature: gene Location: 25009-26568 bp Feature: domain Description: PRK14975 Location: 25090-26491 bp Feature: domain Description: PRK14975 Location: 2 5090-2 6491 bp Feature: gene Location: 26561-28402 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 26972-27611 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 2 6972 -2 7611 bp Feature: gene Location: 28822-29844 bp Feature: domain Description: COG3666 Location: 28864-29308 bp Feature: domain Description: COG3666 Location: 2 8864-2 9308 bp Feature: gene Location: 30038-30193 bp Feature: domain Description: DDE_Tnp_1_6 Location: 30044-30155 bp Feature: domain Description: DDE_Tnp_1_6 Location: 30044-30155 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional), RVT-UG9, COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751)

Seq: RBPO01000140.1 (1918 bp)
Overview 1 RT 1: 7-1916 bp Neighborhood of RT #1 [7, 1916] RVT-UG8 Feature: gene Location: 7-1122 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 22-394 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 22-3 94 bp Feature: gene Location: 1100-1687 bp Feature: gene Location: 1674-1916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8

Seq: RBPO01000020.1 (7499 bp)
Overview 1 RT 1: 2969-7223 bp Neighborhood of RT #1 [2969, 7495] SLATT_5 RVT-UG17 SLATT_5 RVT-UG3 Feature: gene Location: 2969-3166 bp Feature: gene Location: 3538-4080 bp Feature: domain Description: SLATT_5 Location: 3544-4039 bp Feature: domain Description: SLATT_5 Location: 354 4 -4 039 bp Feature: gene Location: 4077-5441 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4305-4908 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4 305-4 908 bp Feature: gene Location: 5793-6473 bp Feature: domain Description: SLATT_5 Location: 5865-6402 bp Feature: domain Description: SLATT_5 Location: 5865-64 02 bp Feature: gene Location: 6467-7495 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 6755-7223 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 6755-7223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, RVT-UG3

Seq: RBPO01000289.1 (1896 bp)
Overview 1 RT 1: 3-1703 bp Neighborhood of RT #1 [3, 1810] RVT-GII GIIM Feature: gene Location: 3-161 bp Feature: gene Location: 322-468 bp Feature: gene Location: 542-1810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 746-1403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 746-1403 bp Feature: domain Description: GIIM Note: maturase Location: 1481-1703 bp Feature: domain Description: GIIM Note: maturase Location: 1481-1703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)