myRT

myRT report for GCA_003702325.1_ASM370232v1

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Seq: RBTX01000015.1 (25105 bp)
Overview 1 RT 1: 12386-19469 bp Neighborhood of RT #1 [12386, 19471] FimA RVT-GII GIIM autotrans_barl Feature: gene Location: 12386-13507 bp Feature: domain Description: FimA Location: 13019-13505 bp Feature: domain Description: FimA Location: 1 301 9-1 3505 bp Feature: gene Location: 13545-15050 bp Feature: gene Location: 15250-16506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15442-16057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5442-1 6057 bp Feature: domain Description: GIIM Note: maturase Location: 16114-16339 bp Feature: domain Description: GIIM Note: maturase Location: 1 61 1 4-1 6339 bp Feature: gene Location: 16511-17122 bp Feature: gene Location: 17147-19471 bp Feature: domain Description: autotrans_barl Location: 18254-19469 bp Feature: domain Description: autotrans_barl Location: 1 8254-1 9469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimA (pfam16970), RVT-GII, GIIM (pfam08388), autotrans_barl (TIGR01414)

Seq: RBTX01000417.1 (3925 bp)
Overview 1 RT 1: 1221-3868 bp Neighborhood of RT #1 [1221, 3897] Acetyltransf_1 RVT-G2L4 SLATT_5 Feature: gene Location: 1221-1667 bp Feature: domain Description: Acetyltransf_1 Location: 1353-1614 bp Feature: domain Description: Acetyltransf_1 Location: 1353-1614 bp Feature: gene Location: 1729-1884 bp Feature: gene Location: 1945-3192 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 2158-2749 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 2 158-2 749 bp Feature: gene Location: 3262-3897 bp Feature: domain Description: SLATT_5 Location: 3265-3868 bp Feature: domain Description: SLATT_5 Location: 32 65-3868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), RVT-G2L4, SLATT_5 (pfam18160)

Seq: RBTX01000037.1 (13533 bp)
Overview 1 RT 1: 11026-12773 bp Neighborhood of RT #1 [11026, 13327] T6SS_HCP RVT-UG17 Feature: gene Location: 11026-11520 bp Feature: domain Description: T6SS_HCP Location: 11044-11437 bp Feature: domain Description: T6SS_HCP Location: 11044-1143 7 bp Feature: gene Location: 11505-11750 bp Feature: gene Location: 11891-13327 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 12161-12773 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 12161-12773 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T6SS_HCP (pfam05638), RVT-UG17

Seq: RBTX01000199.1 (1732 bp)
Overview 1 RT 1: 3-1731 bp Neighborhood of RT #1 [3, 1731] RVT-GII GIIM Feature: gene Location: 3-1223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 246-861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24 6-861 bp Feature: domain Description: GIIM Note: maturase Location: 906-1116 bp Feature: domain Description: GIIM Note: maturase Location: 906-1116 bp Feature: gene Location: 1447-1731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)