myRT

myRT report for GCA_003702785.1_ASM370278v1

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Seq: RBUI01000080.1 (53843 bp)
Overview 1 RT 1: 45466-50431 bp Neighborhood of RT #1 [45466, 50431] DUF1493 RVT-UG15 DUF3644 Feature: gene Location: 45466-45888 bp Feature: domain Description: DUF1493 Location: 45550-45790 bp Feature: domain Description: DUF1 493 Location: 45550-45790 bp Feature: gene Location: 46183-46473 bp Feature: gene Location: 47577-48884 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 47682-48096 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 47682-48096 bp Feature: gene Location: 49118-50101 bp Feature: domain Description: DUF3644 Location: 49253-49484 bp Feature: domain Description: DUF3644 Location: 49253-49484 bp Feature: gene Location: 50294-50431 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1493 (pfam07377), RVT-UG15, DUF3644 (pfam12358)

Seq: RBUI01000023.1 (5204 bp)
Overview 1 RT 1: 2-4446 bp Neighborhood of RT #1 [2, 4523] RVT-GII PaaK MATE_like_2 Feature: gene Location: 2-1513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431-1121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431-112 1 bp Feature: gene Location: 1878-3065 bp Feature: domain Description: PaaK Location: 1989-2919 bp Feature: domain Description: PaaK Location: 1989-2 919 bp Feature: gene Location: 3147-4523 bp Feature: domain Description: MATE_like_2 Location: 3171-4446 bp Feature: domain Description: MATE_like_2 Location: 3171-4446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PaaK (COG1541), MATE_like_2 (cd13149)

Seq: RBUI01000045.1 (21128 bp)
Overview 1 RT 1: 5574-11925 bp Neighborhood of RT #1 [5574, 11939] Prim-Pol primase_Cterm RVT-Retrons RVT-Retrons Phage_holin_3_1 Feature: gene Location: 5574-8267 bp Feature: domain Description: Prim-Pol Location: 5610-6192 bp Feature: domain Description: Prim-Pol Location: 5610-6192 bp Feature: domain Description: primase_Cterm Location: 7395-8040 bp Feature: domain Description: primase_Cterm Location: 73 95-8040 bp Feature: gene Location: 8596-9057 bp Feature: gene Location: 9393-9776 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9528-9774 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9528-9774 bp Feature: gene Location: 9815-10003 bp Feature: gene Location: 9788-11239 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9791-10232 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9791-1023 2 bp Feature: gene Location: 11322-11507 bp Feature: gene Location: 11616-11939 bp Feature: domain Description: Phage_holin_3_1 Location: 11634-11925 bp Feature: domain Description: Phage_holin_3 _1 Location: 1163 4-11925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prim-Pol (smart00943), primase_Cterm (TIGR01613), RVT-Retrons, Phage_holin_3_1 (pfam05106)