myRT

myRT report for GCA_003703105.1_ASM370310v1

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Seq: RBUV01000090.1 (21140 bp)
Overview 1 RT 1: 14963-19211 bp Neighborhood of RT #1 [14963, 19211] RVT-UG15 DUF3644 Feature: gene Location: 14963-15253 bp Feature: gene Location: 15562-15861 bp Feature: gene Location: 16006-17664 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 16462-16876 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 1 6462-1 6876 bp Feature: gene Location: 17898-18881 bp Feature: domain Description: DUF3644 Location: 18033-18264 bp Feature: domain Description: DUF3644 Location: 1 8033-1 8264 bp Feature: gene Location: 19074-19211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG15, DUF3644 (pfam12358)

Seq: RBUV01000091.1 (4537 bp)
Overview 1 RT 1: 319-4536 bp Neighborhood of RT #1 [319, 4536] RVT-GII Feature: gene Location: 319-525 bp Feature: gene Location: 1134-1454 bp Feature: gene Location: 2012-3343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2261-2951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 61-2 951 bp Feature: gene Location: 3469-3807 bp Feature: gene Location: 4087-4536 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RBUV01000040.1 (11761 bp)
Overview 1 RT 1: 5479-11748 bp Neighborhood of RT #1 [5479, 11759] Prim-Pol primase_Cterm RVT-Retrons Phage_holin_3_1 Feature: gene Location: 5479-8172 bp Feature: domain Description: Prim-Pol Location: 5515-6097 bp Feature: domain Description: Prim-Pol Location: 5515-6097 bp Feature: domain Description: primase_Cterm Location: 7300-7945 bp Feature: domain Description: primase_Cterm Location: 73 00-7945 bp Feature: gene Location: 8501-8962 bp Feature: gene Location: 9298-11145 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9433-10138 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 943 3 -1013 8 bp Feature: gene Location: 11221-11406 bp Feature: gene Location: 11427-11759 bp Feature: domain Description: Phage_holin_3_1 Location: 11538-11748 bp Feature: domain Description: Phage_holin_3 _1 Location: 1153 8-11748 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prim-Pol (smart00943), primase_Cterm (TIGR01613), RVT-Retrons, Phage_holin_3_1 (pfam05106)