myRT

myRT report for GCA_003709525.1_ASM370952v1

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Seq: RCUB01000014.1 (119156 bp)
Overview 1 RT 1: 2704-9626 bp Neighborhood of RT #1 [2704, 9634] PRK10473 PRK10216 RVT_N RVT-GII GIIM PRK12440 CeuD Feature: gene Location: 2704-3957 bp Feature: domain Description: PRK10473 Location: 2773-3946 bp Feature: domain Description: PRK1 0473 Location: 2773-3946 bp Feature: gene Location: 3932-4888 bp Feature: domain Description: PRK10216 Location: 3935-4880 bp Feature: domain Description: PRK1 021 6 Location: 3935-4880 bp Feature: gene Location: 5590-7062 bp Feature: domain Description: RVT_N Location: 5638-5881 bp Feature: domain Description: RVT_N Location: 5638-5881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5926-6553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5926-6553 bp Feature: domain Description: GIIM Note: maturase Location: 6616-6838 bp Feature: domain Description: GIIM Note: maturase Location: 661 6-6838 bp Feature: gene Location: 7350-8543 bp Feature: domain Description: PRK12440 Location: 7353-8541 bp Feature: domain Description: PRK1 2440 Location: 7353-8541 bp Feature: gene Location: 8873-9634 bp Feature: domain Description: CeuD Location: 8876-9626 bp Feature: domain Description: CeuD Location: 8876-9626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), PRK10216 (HTH-type transcriptional regulator YidZ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK12440 (acetate/propionate family kinase), CeuD (COG4604)

Seq: RCUB01000277.1 (657 bp)
Overview 1 RT 1: 2-643 bp Neighborhood of RT #1 [2, 654] RVT-GII RVT-GII Feature: gene Location: 2-226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-119 bp Feature: gene Location: 223-654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 226-643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 6-643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RCUB01000432.1 (1783 bp)
Overview 1 RT 1: 2-1551 bp Neighborhood of RT #1 [2, 1551] RVT-GII GIIM Feature: gene Location: 2-1228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206-863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206-863 bp Feature: domain Description: GIIM Note: maturase Location: 941-1163 bp Feature: domain Description: GIIM Note: maturase Location: 941-1163 bp Feature: gene Location: 1279-1551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RCUB01000002.1 (102039 bp)
Overview 1 RT 1: 5691-11581 bp Neighborhood of RT #1 [5691, 11581] groES groEL RVT_N RVT-GII GIIM HNHc YegP Feature: gene Location: 5691-5981 bp Feature: domain Description: groES Location: 5694-5979 bp Feature: domain Description: groES Location: 5694 -5979 bp Feature: gene Location: 6051-7685 bp Feature: domain Description: groEL Location: 6057-7674 bp Feature: domain Description: groEL Location: 6057-7674 bp Feature: gene Location: 8781-10460 bp Feature: domain Description: RVT_N Location: 8853-9093 bp Feature: domain Description: RVT_N Location: 8853-9093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9141-9786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 914 1-9786 bp Feature: domain Description: GIIM Note: maturase Location: 9837-10071 bp Feature: domain Description: GIIM Note: maturase Location: 9837-10071 bp Feature: domain Description: HNHc Note: nucleases Location: 10287-10449 bp Feature: domain Description: HNHc Note: nucleases Location: 10287-104 4 9 bp Feature: gene Location: 10567-10719 bp Feature: domain Description: YegP Location: 10570-10687 bp Feature: domain Description: YegP Location: 10570-10687 bp Feature: gene Location: 11012-11581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groES (PRK14533), groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), YegP (COG3422)

Seq: RCUB01000201.1 (2009 bp)
Overview 1 RT 1: 112-1936 bp Neighborhood of RT #1 [112, 1936] RVT_N RVT-GII GIIM Feature: gene Location: 112-1584 bp Feature: domain Description: RVT_N Location: 160-403 bp Feature: domain Description: RVT_N Location: 160-403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 448-1075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 448-1075 bp Feature: domain Description: GIIM Note: maturase Location: 1132-1360 bp Feature: domain Description: GIIM Note: maturase Location: 1132-1360 bp Feature: gene Location: 1763-1936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: RCUB01000466.1 (539 bp)
Overview 1 RT 1: 2-461 bp Neighborhood of RT #1 [2, 538] RVT-Retrons Feature: gene Location: 2-538 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 164-461 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16 4-46 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: RCUB01001278.1 (423 bp)
Overview 1 RT 1: 1-199 bp Neighborhood of RT #1 [1, 420] RVT-UG8 Feature: gene Location: 1-420 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 4-199 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 4-199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8