myRT

myRT report for GCA_003730825.1_ASM373082v1

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Seq: MCKF01000034.1 (357279 bp)
Overview 1 RT 1: 544-4267 bp Neighborhood of RT #1 [544, 4272] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 544-750 bp Feature: gene Location: 1084-1293 bp Feature: gene Location: 1428-3329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1695-2526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 695-2526 bp Feature: domain Description: Intron_maturas2 Location: 2640-2898 bp Feature: domain Description: Intron_maturas2 Location: 2640-2898 bp Feature: domain Description: HNHc Note: nucleases Location: 3072-3234 bp Feature: domain Description: HNHc Note: nucleases Location: 3072-3234 bp Feature: gene Location: 3524-3976 bp Feature: domain Description: PRK13732 Location: 3530-3974 bp Feature: domain Description: PRK1 3732 Location: 3530-3974 bp Feature: gene Location: 4039-4272 bp Feature: domain Description: DUF905 Location: 4069-4267 bp Feature: domain Description: DUF905 Location: 4069-4267 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: MCKF01000011.1 (81282 bp)
Overview 1 RT 1: 19164-23105 bp Neighborhood of RT #1 [19164, 23105] RVT-Retrons Feature: gene Location: 19164-20303 bp Feature: gene Location: 20349-20516 bp Feature: gene Location: 20538-22310 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20697-21315 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 0697-2 1315 bp Feature: gene Location: 22531-22674 bp Feature: gene Location: 22866-23105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: MCKF01000038.1 (19157 bp)
Overview 1 RT 1: 7724-11968 bp Neighborhood of RT #1 [7724, 11968] Macro_Appr_pase Caudo_TAP RVT-UG17 SLATT_5 Feature: gene Location: 7724-8626 bp Feature: domain Description: Macro_Appr_pase Location: 7742-8255 bp Feature: domain Description: Macro_Appr_pase Location: 7742-8255 bp Feature: gene Location: 8635-9219 bp Feature: domain Description: Caudo_TAP Location: 8851-9208 bp Feature: domain Description: Caudo_TAP Location: 8851-9208 bp Feature: gene Location: 9332-10702 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 9560-10166 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 9560-10166 bp Feature: gene Location: 10680-11384 bp Feature: domain Description: SLATT_5 Location: 10842-11352 bp Feature: domain Description: SLATT_5 Location: 10842-113 52 bp Feature: gene Location: 11792-11968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Macro_Appr_pase (cd02900), Caudo_TAP (pfam02413), RVT-UG17, SLATT_5 (pfam18160)

Seq: MCKF01000037.1 (15574 bp)
Overview 1 RT 1: 10739-14685 bp Neighborhood of RT #1 [10739, 14723] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 10739-11116 bp Feature: domain Description: InsE Location: 10805-11099 bp Feature: domain Description: InsE Location: 10805-11099 bp Feature: gene Location: 11223-11702 bp Feature: domain Description: PHA02517 Location: 11283-11637 bp Feature: domain Description: PHA02517 Location: 11283-11637 bp Feature: gene Location: 12294-13817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12567-13299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12567-13299 bp Feature: domain Description: GIIM Note: maturase Location: 13374-13572 bp Feature: domain Description: GIIM Note: maturase Location: 13374 -13572 bp Feature: gene Location: 13934-14290 bp Feature: domain Description: PHA02517 Location: 13937-14246 bp Feature: domain Description: PHA02517 Location: 13937-14 24 6 bp Feature: gene Location: 14319-14723 bp Feature: domain Description: InsE Location: 14349-14685 bp Feature: domain Description: InsE Location: 14 34 9-14 685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)