myRT

myRT report for GCA_003731105.1_ASM373110v1

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Seq: MCKU01000064.1 (5182 bp)
Overview 1 RT 1: 1148-4474 bp Neighborhood of RT #1 [1148, 4474] FRG RVT-Retrons HTH_XRE Feature: gene Location: 1148-1297 bp Feature: gene Location: 1336-2700 bp Feature: domain Description: FRG Location: 1903-2188 bp Feature: domain Description: FRG Location: 1 903-21 88 bp Feature: gene Location: 2809-3759 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2989-3532 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2989-3532 bp Feature: gene Location: 3725-4057 bp Feature: domain Description: HTH_XRE Location: 3752-3911 bp Feature: domain Description: HTH_XRE Location: 3752-391 1 bp Feature: gene Location: 4082-4474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FRG (smart00901), RVT-Retrons, HTH_XRE (smart00530)

Seq: MCKU01000020.1 (63954 bp)
Overview 1 RT 1: 54231-58639 bp Neighborhood of RT #1 [54231, 59376] RVT_N RVT-GII GIIM HNHc AdoMet_MTases DUF3560 Feature: gene Location: 54231-54467 bp Feature: gene Location: 54536-54796 bp Feature: gene Location: 55370-57037 bp Feature: domain Description: RVT_N Location: 55418-55655 bp Feature: domain Description: RVT_N Location: 55418-55655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55706-56348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55706-56348 bp Feature: domain Description: GIIM Note: maturase Location: 56399-56633 bp Feature: domain Description: GIIM Note: maturase Location: 56399-56633 bp Feature: domain Description: HNHc Note: nucleases Location: 56843-57002 bp Feature: domain Description: HNHc Note: nucleases Location: 56843-57002 bp Feature: gene Location: 57406-57969 bp Feature: domain Description: AdoMet_MTases Location: 57568-57868 bp Feature: domain Description: AdoMet_MTases Location: 57568-57868 bp Feature: gene Location: 58015-59376 bp Feature: domain Description: DUF3560 Location: 58282-58639 bp Feature: domain Description: DUF3560 Location: 582 82 -58639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), AdoMet_MTases (cl17173), DUF3560 (pfam12083)

Seq: MCKU01000023.1 (270890 bp)
Overview 1 RT 1: 127724-133755 bp Neighborhood of RT #1 [127724, 133755] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 127724-128644 bp Feature: domain Description: AbiEii Location: 127766-128507 bp Feature: domain Description: AbiEii Location: 127766-128507 bp Feature: gene Location: 128631-129434 bp Feature: domain Description: AbiEi_3_N Location: 128664-128925 bp Feature: domain Description: AbiEi_3 _N Location: 128664-128925 bp Feature: domain Description: AbiEi_3 Location: 128937-129393 bp Feature: domain Description: AbiEi_3 Location: 12893 7-1293 93 bp Feature: gene Location: 129729-132938 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 130257-130746 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 13 0257-13 0746 bp Feature: domain Description: nitrilase Location: 132252-132849 bp Feature: domain Description: nitrilase Location: 13 2252-13 2849 bp Feature: gene Location: 133099-133239 bp Feature: domain Description: Phage_ASH Location: 133126-133219 bp Feature: domain Description: Phage_ASH Location: 13 3 126-13 3 219 bp Feature: gene Location: 133285-133755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)