myRT

myRT report for GCA_003731255.1_ASM373125v1

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Seq: MCLD01000056.1 (233021 bp)
Overview 1 RT 1: 14556-21343 bp Neighborhood of RT #1 [14556, 22233] Q RVT-Retrons RVT-AbiP2 Phage_GPA Feature: gene Location: 14556-15575 bp Feature: domain Description: Q Location: 14559-15570 bp Feature: domain Description: Q Location: 1 4559-1 5570 bp Feature: gene Location: 15618-16325 bp Feature: gene Location: 16322-17512 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16472-17054 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 6472-1 7054 bp Feature: gene Location: 18063-19607 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 18480-18933 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 8480-1 8933 bp Feature: gene Location: 19773-20033 bp Feature: gene Location: 20095-22233 bp Feature: domain Description: Phage_GPA Location: 20356-21343 bp Feature: domain Description: Phage_GPA Location: 20356-21 343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons, RVT-AbiP2, Phage_GPA (pfam05840)

Seq: MCLD01000036.1 (7313 bp)
Overview 1 RT 1: 3465-7312 bp Neighborhood of RT #1 [3465, 7312] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 3465-3698 bp Feature: domain Description: DUF905 Location: 3495-3693 bp Feature: domain Description: DUF905 Location: 3495-3693 bp Feature: gene Location: 3761-4213 bp Feature: domain Description: PRK13732 Location: 3767-4211 bp Feature: domain Description: PRK13732 Location: 3767-42 11 bp Feature: gene Location: 4408-6309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4675-5506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4675-5506 bp Feature: domain Description: Intron_maturas2 Location: 5620-5878 bp Feature: domain Description: Intron_maturas2 Location: 562 0-5878 bp Feature: domain Description: HNHc Note: nucleases Location: 6052-6214 bp Feature: domain Description: HNHc Note: nucleases Location: 6052 -62 14 bp Feature: gene Location: 7106-7312 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: MCLD01000018.1 (35502 bp)
Overview 1 RT 1: 31724-35159 bp Neighborhood of RT #1 [31724, 35224] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 31724-32128 bp Feature: domain Description: InsE Location: 31754-32090 bp Feature: domain Description: InsE Location: 3 1754-3 2090 bp Feature: gene Location: 32157-32513 bp Feature: domain Description: PHA02517 Location: 32160-32469 bp Feature: domain Description: PHA02517 Location: 3 2160-3 2469 bp Feature: gene Location: 32630-34153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32903-33635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 2903 -3 3 63 5 bp Feature: domain Description: GIIM Note: maturase Location: 33710-33908 bp Feature: domain Description: GIIM Note: maturase Location: 3 3 710-3 3 908 bp Feature: gene Location: 34107-34532 bp Feature: gene Location: 34745-35224 bp Feature: domain Description: PHA02517 Location: 34805-35159 bp Feature: domain Description: PHA02517 Location: 3 4805-3 5159 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)