myRT

myRT report for GCA_003731275.1_ASM373127v1

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Seq: MCLA01000056.1 (277116 bp)
Overview 1 RT 1: 11973-18760 bp Neighborhood of RT #1 [11973, 19650] Q RVT-Retrons RVT-AbiP2 Phage_GPA Feature: gene Location: 11973-12992 bp Feature: domain Description: Q Location: 11976-12987 bp Feature: domain Description: Q Location: 1 1 976-1 2987 bp Feature: gene Location: 13035-13742 bp Feature: gene Location: 13739-14929 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13889-14471 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 3889-1 4471 bp Feature: gene Location: 15480-17024 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 15897-16350 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 5897-1 6350 bp Feature: gene Location: 17190-17450 bp Feature: gene Location: 17512-19650 bp Feature: domain Description: Phage_GPA Location: 17773-18760 bp Feature: domain Description: Phage_GPA Location: 1 7773-1 8760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons, RVT-AbiP2, Phage_GPA (pfam05840)

Seq: MCLA01000015.1 (35502 bp)
Overview 1 RT 1: 31724-35159 bp Neighborhood of RT #1 [31724, 35224] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 31724-32128 bp Feature: domain Description: InsE Location: 31754-32090 bp Feature: domain Description: InsE Location: 31754-32 090 bp Feature: gene Location: 32157-32513 bp Feature: domain Description: PHA02517 Location: 32160-32469 bp Feature: domain Description: PHA02 517 Location: 32 160-32 469 bp Feature: gene Location: 32630-34153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32903-33635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 903-33635 bp Feature: domain Description: GIIM Note: maturase Location: 33710-33908 bp Feature: domain Description: GIIM Note: maturase Location: 33710-33908 bp Feature: gene Location: 34107-34532 bp Feature: gene Location: 34745-35224 bp Feature: domain Description: PHA02517 Location: 34805-35159 bp Feature: domain Description: PHA02 517 Location: 34805-35159 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: MCLA01000008.1 (133610 bp)
Overview 1 RT 1: 126095-130141 bp Neighborhood of RT #1 [126095, 130146] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 126095-126505 bp Feature: gene Location: 126958-127167 bp Feature: gene Location: 127302-129203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127569-128400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127569-128400 bp Feature: domain Description: Intron_maturas2 Location: 128514-128772 bp Feature: domain Description: Intron_maturas2 Location: 128514-128772 bp Feature: domain Description: HNHc Note: nucleases Location: 128946-129108 bp Feature: domain Description: HNHc Note: nucleases Location: 128946-129108 bp Feature: gene Location: 129398-129850 bp Feature: domain Description: PRK13732 Location: 129404-129848 bp Feature: domain Description: PRK13 73 2 Location: 129404-129848 bp Feature: gene Location: 129913-130146 bp Feature: domain Description: DUF905 Location: 129943-130141 bp Feature: domain Description: DUF905 Location: 129943 -13 0141 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)