myRT

myRT report for GCA_003731485.1_ASM373148v1

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Seq: MCLO01000032.1 (50434 bp)
Overview 1 RT 1: 40228-42064 bp Neighborhood of RT #1 [40228, 42129] PRK10173 RVT-GII PHA02517 Feature: gene Location: 40228-40539 bp Feature: domain Description: PRK10173 Location: 40231-40450 bp Feature: domain Description: PRK1 01 73 Location: 40231 -40450 bp Feature: gene Location: 40653-40850 bp Feature: gene Location: 40858-41256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41131-41191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 1 31 -41 1 91 bp Feature: gene Location: 41210-41635 bp Feature: gene Location: 41848-42129 bp Feature: domain Description: PHA02517 Location: 41854-42064 bp Feature: domain Description: PHA0251 7 Location: 41 854-42064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)

Seq: MCLO01000045.1 (346685 bp)
Overview 1 RT 1: 274166-280197 bp Neighborhood of RT #1 [274166, 280197] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 274166-275086 bp Feature: domain Description: AbiEii Location: 274208-274949 bp Feature: domain Description: AbiEii Location: 2 742 08-2 74949 bp Feature: gene Location: 275073-275876 bp Feature: domain Description: AbiEi_3_N Location: 275106-275367 bp Feature: domain Description: AbiEi_3_N Location: 2 75106-2 75367 bp Feature: domain Description: AbiEi_3 Location: 275379-275835 bp Feature: domain Description: AbiEi_3 Location: 2 75379-2 75835 bp Feature: gene Location: 276171-279380 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 276699-277188 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 76699-2 77188 bp Feature: domain Description: nitrilase Location: 278694-279291 bp Feature: domain Description: nitrilase Location: 2 78694-2 792 91 bp Feature: gene Location: 279541-279681 bp Feature: domain Description: Phage_ASH Location: 279568-279661 bp Feature: domain Description: Phage_ASH Location: 2 79568-2 79661 bp Feature: gene Location: 279727-280197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: MCLO01000019.1 (74683 bp)
Overview 1 RT 1: 2-2186 bp Neighborhood of RT #1 [2, 2224] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 2-1318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68-800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68-800 bp Feature: domain Description: GIIM Note: maturase Location: 875-1073 bp Feature: domain Description: GIIM Note: maturase Location: 875-1073 bp Feature: gene Location: 1495-1791 bp Feature: domain Description: PHA02517 Location: 1498-1747 bp Feature: domain Description: PHA02517 Location: 1498-1747 bp Feature: gene Location: 1820-2224 bp Feature: domain Description: InsE Location: 1850-2186 bp Feature: domain Description: InsE Location: 1850-2186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: MCLO01000054.1 (6518 bp)
Overview 1 RT 1: 2484-5810 bp Neighborhood of RT #1 [2484, 5810] FRG RVT-Retrons HTH_XRE Feature: gene Location: 2484-2633 bp Feature: gene Location: 2672-4036 bp Feature: domain Description: FRG Location: 3239-3524 bp Feature: domain Description: FRG Location: 3239-3524 bp Feature: gene Location: 4145-5095 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4325-4868 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4 325-4 868 bp Feature: gene Location: 5061-5381 bp Feature: domain Description: HTH_XRE Location: 5076-5235 bp Feature: domain Description: HTH_XRE Location: 5076-5235 bp Feature: gene Location: 5418-5810 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FRG (smart00901), RVT-Retrons, HTH_XRE (smart00530)

Seq: MCLO01000035.1 (26223 bp)
Overview 1 RT 1: 15606-20028 bp Neighborhood of RT #1 [15606, 20765] PRK13732 RVT_N RVT-GII GIIM AdoMet_MTases DUF3560 Feature: gene Location: 15606-16133 bp Feature: domain Description: PRK13732 Location: 15609-16131 bp Feature: domain Description: PRK13732 Location: 15 609-16131 bp Feature: gene Location: 16254-16586 bp Feature: gene Location: 17026-18588 bp Feature: domain Description: RVT_N Location: 17074-17311 bp Feature: domain Description: RVT_N Location: 17074-17311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17362-18004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17362-18004 bp Feature: domain Description: GIIM Note: maturase Location: 18055-18289 bp Feature: domain Description: GIIM Note: maturase Location: 1805 5 -18289 bp Feature: gene Location: 18795-19358 bp Feature: domain Description: AdoMet_MTases Location: 18957-19245 bp Feature: domain Description: AdoMet_MTases Location: 1895 7-19245 bp Feature: gene Location: 19404-20765 bp Feature: domain Description: DUF3560 Location: 19671-20028 bp Feature: domain Description: DUF35 60 Location: 19671-20028 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13732 (single-stranded DNA-binding protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), AdoMet_MTases (cl17173), DUF3560 (pfam12083)