myRT

myRT report for GCA_003731595.1_ASM373159v1

Download annotations/find similar RTs

Seq: MCLQ01000085.1 (130405 bp)
Overview 1 RT 1: 3866-8128 bp Neighborhood of RT #1 [3866, 8865] RVT_N RVT-GII GIIM HNHc AdoMet_MTases DUF3560 Feature: gene Location: 3866-3997 bp Feature: gene Location: 4019-4279 bp Feature: gene Location: 4853-6520 bp Feature: domain Description: RVT_N Location: 4901-5138 bp Feature: domain Description: RVT_N Location: 4901 -51 38 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5189-5831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 89-5831 bp Feature: domain Description: GIIM Note: maturase Location: 5882-6116 bp Feature: domain Description: GIIM Note: maturase Location: 5882-61 1 6 bp Feature: domain Description: HNHc Note: nucleases Location: 6326-6485 bp Feature: domain Description: HNHc Note: nucleases Location: 6326-6485 bp Feature: gene Location: 6895-7458 bp Feature: domain Description: AdoMet_MTases Location: 7057-7357 bp Feature: domain Description: AdoMet_MTases Location: 7057-7357 bp Feature: gene Location: 7504-8865 bp Feature: domain Description: DUF3560 Location: 7771-8128 bp Feature: domain Description: DUF3560 Location: 7771 -81 28 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), AdoMet_MTases (cl17173), DUF3560 (pfam12083)

Seq: MCLQ01000034.1 (174259 bp)
Overview 1 RT 1: 127724-133755 bp Neighborhood of RT #1 [127724, 133755] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 127724-128644 bp Feature: domain Description: AbiEii Location: 127766-128507 bp Feature: domain Description: AbiEii Location: 12 7766-12 8507 bp Feature: gene Location: 128631-129434 bp Feature: domain Description: AbiEi_3_N Location: 128664-128925 bp Feature: domain Description: AbiEi_3_N Location: 12 8664-12 892 5 bp Feature: domain Description: AbiEi_3 Location: 128937-129393 bp Feature: domain Description: AbiEi_3 Location: 12 8937-12 9393 bp Feature: gene Location: 129729-132938 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 130257-130746 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1302 57-130746 bp Feature: domain Description: nitrilase Location: 132252-132849 bp Feature: domain Description: nitrilase Location: 132 2 52 -132 849 bp Feature: gene Location: 133099-133239 bp Feature: domain Description: Phage_ASH Location: 133126-133219 bp Feature: domain Description: Phage_ASH Location: 13312 6-1332 19 bp Feature: gene Location: 133285-133755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: MCLQ01000061.1 (7396 bp)
Overview 1 RT 1: 1594-4920 bp Neighborhood of RT #1 [1594, 4920] FRG RVT-Retrons HTH_XRE Feature: gene Location: 1594-1743 bp Feature: gene Location: 1782-3146 bp Feature: domain Description: FRG Location: 2349-2634 bp Feature: domain Description: FRG Location: 23 49-263 4 bp Feature: gene Location: 3255-4205 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3435-3978 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 43 5-3 978 bp Feature: gene Location: 4171-4503 bp Feature: domain Description: HTH_XRE Location: 4198-4357 bp Feature: domain Description: HTH_XRE Location: 4198-43 57 bp Feature: gene Location: 4528-4920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FRG (smart00901), RVT-Retrons, HTH_XRE (smart00530)