myRT

myRT report for GCA_003731635.1_ASM373163v1

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Seq: RCUA01000019.1 Alteromonas oceani strain S35, whole genome shotgun sequence (54277 bp)
Overview 1 RT 1: 1-2650 bp Neighborhood of RT #1 [1, 2650] RVT-GII GIIM Feature: gene Location: 1-1209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151-772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 -772 bp Feature: domain Description: GIIM Note: maturase Location: 817-1048 bp Feature: domain Description: GIIM Note: maturase Location: 81 7-1 048 bp Feature: gene Location: 1367-2440 bp Feature: gene Location: 2468-2650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RCUA01000014.1 Alteromonas oceani strain S35, whole genome shotgun sequence (181344 bp)
Overview 1 RT 1: 14249-19567 bp Neighborhood of RT #1 [14249, 19617] XerC RVT-GII GIIM PEP-CTERM LysR Feature: gene Location: 14249-15607 bp Feature: domain Description: XerC Location: 14591-15467 bp Feature: domain Description: XerC Location: 14591-15467 bp Feature: gene Location: 15629-15799 bp Feature: gene Location: 16191-17579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16521-17139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1652 1-17139 bp Feature: domain Description: GIIM Note: maturase Location: 17187-17415 bp Feature: domain Description: GIIM Note: maturase Location: 17187-17415 bp Feature: gene Location: 17891-18709 bp Feature: domain Description: PEP-CTERM Location: 18635-18701 bp Feature: domain Description: PEP-CTERM Location: 18635-18701 bp Feature: gene Location: 18748-19617 bp Feature: domain Description: LysR Location: 18763-19567 bp Feature: domain Description: LysR Location: 18763-19567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XerC (COG4973), RVT-GII, GIIM (pfam08388), PEP-CTERM, LysR (COG0583)

Seq: RCUA01000009.1 Alteromonas oceani strain S35, whole genome shotgun sequence (34578 bp)
Overview 1 RT 1: 29979-34414 bp Neighborhood of RT #1 [29979, 34575] E_set_pullulanase_like M14-like RVT-GII GIIM Feature: gene Location: 29979-30416 bp Feature: domain Description: E_set_pullulanase_like Location: 30072-30336 bp Feature: domain Description: E_set_pullulanase_like Location: 3 0072-3 03 3 6 bp Feature: gene Location: 30500-33178 bp Feature: domain Description: M14-like Location: 30908-31547 bp Feature: domain Description: M14-like Location: 3 0908-3 1547 bp Feature: gene Location: 33370-34575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33517-34138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 517-3 413 8 bp Feature: domain Description: GIIM Note: maturase Location: 34183-34414 bp Feature: domain Description: GIIM Note: maturase Location: 3 4183 -3 4414 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT E_set_pullulanase_like (cd02861), M14-like (cd06905), RVT-GII, GIIM (pfam08388)

Seq: RCUA01000008.1 Alteromonas oceani strain S35, whole genome shotgun sequence (26315 bp)
Overview 1 RT 1: 1-2555 bp Neighborhood of RT #1 [1, 2629] RVT-GII GIIM Omp_AT PGPGW Feature: gene Location: 1-1209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151-772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151-772 bp Feature: domain Description: GIIM Note: maturase Location: 817-1048 bp Feature: domain Description: GIIM Note: maturase Location: 817-104 8 bp Feature: gene Location: 1344-2363 bp Feature: domain Description: Omp_AT Location: 1434-2355 bp Feature: domain Description: Omp_AT Location: 14 34 -2355 bp Feature: gene Location: 2396-2629 bp Feature: domain Description: PGPGW Location: 2417-2555 bp Feature: domain Description: PGPGW Location: 24 17-2555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Omp_AT (pfam11557), PGPGW (pfam09656)

Seq: RCUA01000007.1 Alteromonas oceani strain S35, whole genome shotgun sequence (189512 bp)
Overview 1 RT 1: 146214-150912 bp Neighborhood of RT #1 [146214, 150912] PyocinActivator PyocinActivator RVT-UG28 Feature: gene Location: 146214-146738 bp Feature: domain Description: PyocinActivator Location: 146223-146424 bp Feature: domain Description: PyocinActivator Location: 146223-146424 bp Feature: domain Description: PyocinActivator Location: 146472-146682 bp Feature: domain Description: PyocinActivator Location: 146472-146682 bp Feature: gene Location: 146967-147359 bp Feature: gene Location: 147704-149329 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 148118-148754 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 148118-14875 4 bp Feature: gene Location: 149485-149949 bp Feature: gene Location: 150253-150912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PyocinActivator (pfam11112), RVT-UG28

Seq: RCUA01000078.1 Alteromonas oceani strain S35, whole genome shotgun sequence (178443 bp)
Overview 1 RT 1: 174178-178279 bp Neighborhood of RT #1 [174178, 178440] agcS Pepdidase_M14_N M14_PaCCP-like RVT-GII GIIM Feature: gene Location: 174178-175845 bp Feature: domain Description: agcS Location: 174247-175816 bp Feature: domain Description: agcS Location: 174247-175816 bp Feature: gene Location: 175880-177010 bp Feature: domain Description: Pepdidase_M14_N Location: 175889-176207 bp Feature: domain Description: Pepdidase_M14_N Location: 175889-176 207 bp Feature: domain Description: M14_PaCCP-like Location: 176216-176978 bp Feature: domain Description: M14_PaCCP-like Location: 176 216 -176 978 bp Feature: gene Location: 177235-178440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177382-178003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177382-178003 bp Feature: domain Description: GIIM Note: maturase Location: 178048-178279 bp Feature: domain Description: GIIM Note: maturase Location: 178048-178279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT agcS (TIGR00835), Pepdidase_M14_N (pfam18027), M14_PaCCP-like (cd06234), RVT-GII, GIIM (pfam08388)