myRT

myRT report for GCA_003762615.1_ASM376261v1

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Seq: RIAZ01000012.1 (133360 bp)
Overview 1 RT 1: 62036-70425 bp Neighborhood of RT #1 [62036, 70532] RecQ DUF1848 RVT-AbiP2 TonB_C WG_beta_rep Feature: gene Location: 62036-66166 bp Feature: domain Description: RecQ Location: 63590-64856 bp Feature: domain Description: RecQ Location: 63590-64856 bp Feature: gene Location: 66168-67244 bp Feature: domain Description: DUF1848 Location: 66243-67164 bp Feature: domain Description: DUF1 848 Location: 66243-671 64 bp Feature: gene Location: 67313-69274 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 67742-68201 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 67742-68201 bp Feature: gene Location: 69547-69717 bp Feature: gene Location: 69756-70532 bp Feature: domain Description: TonB_C Location: 69999-70230 bp Feature: domain Description: TonB_C Location: 69999-70230 bp Feature: domain Description: WG_beta_rep Location: 70341-70425 bp Feature: domain Description: WG_beta_rep Location: 70341 -70425 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RecQ (COG0514), DUF1848 (pfam08902), RVT-AbiP2, TonB_C (pfam03544), WG_beta_rep (pfam14903)

Seq: RIAZ01000009.1 (139209 bp)
Overview 1 RT 1: 3402-8054 bp Neighborhood of RT #1 [3402, 8054] RVT-DGRs Feature: gene Location: 3402-3806 bp Feature: gene Location: 3827-4408 bp Feature: gene Location: 4582-5400 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4960-5284 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4960-52 84 bp Feature: gene Location: 5700-6995 bp Feature: gene Location: 7017-8054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: RIAZ01000042.1 (18997 bp)
Overview 1 RT 1: 1088-8404 bp Neighborhood of RT #1 [1088, 8412] RVT-DGRs OMP_RagA_SusC Feature: gene Location: 1088-2524 bp Feature: gene Location: 2693-2983 bp Feature: gene Location: 3074-4615 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3284-4025 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 284-4025 bp Feature: gene Location: 4656-5045 bp Feature: gene Location: 5248-8412 bp Feature: domain Description: OMP_RagA_SusC Location: 5344-8404 bp Feature: domain Description: OMP_RagA_SusC Location: 53 44-8404 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, OMP_RagA_SusC (TIGR04056)

Seq: RIAZ01000003.1 (260602 bp)
Overview 1 RT 1: 153431-157096 bp Neighborhood of RT #1 [153431, 157096] RVT-DGRs Feature: gene Location: 153431-153817 bp Feature: gene Location: 153814-154242 bp Feature: gene Location: 154184-155407 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 154529-155159 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 154 529-155159 bp Feature: gene Location: 155473-155622 bp Feature: gene Location: 155720-157096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: RIAZ01000001.1 (444932 bp)
Overview 1 RT 1: 265331-270196 bp Neighborhood of RT #1 [265331, 270196] MurNAc-LAA RVT-DGRs Feature: gene Location: 265331-265945 bp Feature: domain Description: MurNAc-LAA Location: 265340-265916 bp Feature: domain Description: MurNAc-LAA Location: 265 340-265 916 bp Feature: gene Location: 265929-266417 bp Feature: gene Location: 266422-267720 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 266632-267259 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 266632-26725 9 bp Feature: gene Location: 268056-268379 bp Feature: gene Location: 268556-270196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MurNAc-LAA (cl02713), RVT-DGRs

Seq: RIAZ01000017.1 (100657 bp)
Overview 1 RT 1: 84025-88135 bp Neighborhood of RT #1 [84025, 88135] RVT-DGRs Feature: gene Location: 84025-85353 bp Feature: gene Location: 85450-85803 bp Feature: gene Location: 86083-87114 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 86287-86902 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 86 287-86 902 bp Feature: gene Location: 87092-87514 bp Feature: gene Location: 87530-88135 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: RIAZ01000044.1 (16109 bp)
Overview 1 RT 1: 1-3483 bp Neighborhood of RT #1 [1, 3483] RVT-DGRs Feature: gene Location: 1-708 bp Feature: gene Location: 885-1160 bp Feature: gene Location: 1267-2808 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1477-2218 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 147 7 -2218 bp Feature: gene Location: 2849-3238 bp Feature: gene Location: 3250-3483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: RIAZ01000010.1 (136007 bp)
Overview 1 RT 1: 76267-88273 bp Neighborhood of RT #1 [76267, 88281] PRK05399 COG4646 RVT-GII Intron_maturas2 COG4646 HELICc Por_Secre_tail Feature: gene Location: 76267-79734 bp Feature: domain Description: PRK05399 Location: 77497-77824 bp Feature: domain Description: PRK05399 Location: 77497-778 24 bp Feature: domain Description: COG4646 Location: 78817-79723 bp Feature: domain Description: COG4646 Location: 78 8 17-79723 bp Feature: gene Location: 79912-80265 bp Feature: gene Location: 80295-82100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80559-81381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8 0559-8 138 1 bp Feature: domain Description: Intron_maturas2 Location: 81459-81795 bp Feature: domain Description: Intron_maturas2 Location: 8 1459-8 1795 bp Feature: gene Location: 82066-84810 bp Feature: domain Description: COG4646 Location: 82198-83344 bp Feature: domain Description: COG4646 Location: 8 2198 -8 3344 bp Feature: domain Description: HELICc Location: 83365-83755 bp Feature: domain Description: HELICc Location: 8 3365-8 3755 bp Feature: gene Location: 85306-88281 bp Feature: domain Description: Por_Secre_tail Location: 88102-88273 bp Feature: domain Description: Por_Secre_tail Location: 8 8 102-8 8 273 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05399 (DNA mismatch repair protein MutS; Provisional), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HELICc (smart00490), Por_Secre_tail (TIGR04183)