myRT

myRT report for GCA_003795405.1_ASM379540v1

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Seq: PQTF01000021.1 (65420 bp)
Overview 1 RT 1: 492-6523 bp Neighborhood of RT #1 [492, 6523] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 492-1412 bp Feature: domain Description: AbiEii Location: 534-1275 bp Feature: domain Description: AbiEii Location: 534-1 275 bp Feature: gene Location: 1399-2202 bp Feature: domain Description: AbiEi_3_N Location: 1432-1693 bp Feature: domain Description: AbiEi_3_N Location: 1 432-1 693 bp Feature: domain Description: AbiEi_3 Location: 1705-2161 bp Feature: domain Description: AbiEi_3 Location: 1 705-21 61 bp Feature: gene Location: 2497-5706 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3025-3514 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3025-351 4 bp Feature: domain Description: nitrilase Location: 5020-5617 bp Feature: domain Description: nitrilase Location: 5020-561 7 bp Feature: gene Location: 5867-6007 bp Feature: domain Description: Phage_ASH Location: 5894-5987 bp Feature: domain Description: Phage_ASH Location: 5894-5987 bp Feature: gene Location: 6053-6523 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: PQTF01000002.1 (443381 bp)
Overview 1 RT 1: 398062-402949 bp Neighborhood of RT #1 [398062, 402949] P Q RVT-Retrons Feature: gene Location: 398062-399828 bp Feature: domain Description: P Location: 398089-399823 bp Feature: domain Description: P Location: 398089-39982 3 bp Feature: gene Location: 399828-400853 bp Feature: domain Description: Q Location: 399831-400851 bp Feature: domain Description: Q Location: 399831-400851 bp Feature: gene Location: 400871-401833 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 401048-401588 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 401048-401588 bp Feature: gene Location: 401832-401975 bp Feature: gene Location: 401996-402949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons

Seq: PQTF01000035.1 (9711 bp)
Overview 1 RT 1: 4273-7249 bp Neighborhood of RT #1 [4273, 7249] PRK13746 DHFR RVT-GII GIIM Feature: gene Location: 4273-5064 bp Feature: domain Description: PRK13746 Location: 4276-5056 bp Feature: domain Description: PRK13 746 Location: 4276-5056 bp Feature: gene Location: 5114-5572 bp Feature: domain Description: DHFR Location: 5117-5564 bp Feature: domain Description: DHFR Location: 5117-5564 bp Feature: gene Location: 5641-6444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5644-6007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5644-6007 bp Feature: domain Description: GIIM Note: maturase Location: 6049-6262 bp Feature: domain Description: GIIM Note: maturase Location: 6049-6262 bp Feature: gene Location: 6454-7059 bp Feature: gene Location: 7067-7249 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13746 (aminoglycoside resistance protein; Provisional), DHFR (cl17279), RVT-GII, GIIM (pfam08388)