myRT

myRT report for GCA_003807585.1_ASM380758v1

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Seq: RMBX01000001.1 (836805 bp)
Overview 1 RT 1: 561861-567968 bp Neighborhood of RT #1 [561861, 567968] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Feature: gene Location: 561861-564410 bp Feature: domain Description: Bac_Flav_CT_G Location: 561933-564378 bp Feature: domain Description: Bac_Flav_CT_G Location: 561 933-564378 bp Feature: gene Location: 564443-564784 bp Feature: gene Location: 564791-566608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 565055-565877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 565055-565877 bp Feature: domain Description: Intron_maturas2 Location: 565955-566309 bp Feature: domain Description: Intron_maturas2 Location: 565955-566309 bp Feature: domain Description: HNHc Note: nucleases Location: 566438-566579 bp Feature: domain Description: HNHc Note: nucleases Location: 566438-566579 bp Feature: gene Location: 567250-567735 bp Feature: gene Location: 567771-567968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: RMBX01000006.1 (404706 bp)
Overview 1 RT 1: 21961-28916 bp Neighborhood of RT #1 [21961, 28916] TrHb2_O_2 Resolvase Recombinase Zn_ribbon_recom RVT-UG8 RVT-UG3 HTH_3 Feature: gene Location: 21961-22431 bp Feature: domain Description: TrHb2_O_2 Location: 21985-22336 bp Feature: domain Description: TrHb2 _O_2 Location: 2 1985-2 2 336 bp Feature: gene Location: 22637-24160 bp Feature: domain Description: Resolvase Location: 22646-23096 bp Feature: domain Description: Resolvase Location: 2 2 646-2 3096 bp Feature: domain Description: Recombinase Location: 23174-23426 bp Feature: domain Description: Recombinase Location: 2 3174-2 342 6 bp Feature: domain Description: Zn_ribbon_recom Location: 23471-23573 bp Feature: domain Description: Zn_ribbon_recom Location: 2 3471-2 3573 bp Feature: gene Location: 24550-26625 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 25135-25588 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2 5135-2 5588 bp Feature: gene Location: 26626-27987 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 27061-27553 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2 7061-2 7553 bp Feature: gene Location: 28011-28271 bp Feature: domain Description: HTH_3 Location: 28086-28248 bp Feature: domain Description: HTH_3 Location: 2 8086-2 82 48 bp Feature: gene Location: 28692-28916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrHb2_O_2, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-UG8, RVT-UG3, HTH_3 (pfam01381)