myRT

myRT report for GCA_003814875.1_ASM381487v1

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Seq: RKQF01000001.1 (11643955 bp)
Overview 1 RT 1: 2281964-2292113 bp 2 RT 2: 2395271-2402384 bp 3 RT 3: 9646873-9650247 bp 4 RT 4: 11608424-11614105 bp Neighborhood of RT #1 [2281964, 2292113] InsE PHA02517 RVT-GII PinE Zn_ribbon_recom HTH_MerR-trunc HTH_MerR-trunc RVT-GII GIIM COG3547 Neighborhood of RT #2 [2395271, 2402384] mycofact_TetR COG3268 RVT-GII GIIM RVT-GII GIIM Resolvase Recombinase Zn_ribbon_recom Neighborhood of RT #3 [9646873, 9650247] InsQ RVT-GII GIIM Neighborhood of RT #4 [11608424, 11614317] DDE_Tnp_1 RVT-GII GIIM Transposase_mut HTH_29 DDE_3 Feature: gene Location: 2281964-2282428 bp Feature: domain Description: InsE Location: 2282132-2282405 bp Feature: domain Description: InsE Location: 22821 32-2282405 bp Feature: gene Location: 2282425-2283339 bp Feature: domain Description: PHA02517 Location: 2282485-2283286 bp Feature: domain Description: PHA0251 7 Location: 2282485-2283286 bp Feature: gene Location: 2283460-2283873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2283478-2283841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2283478-2283841 bp Feature: gene Location: 2284285-2286555 bp Feature: domain Description: PinE Location: 2284330-2284906 bp Feature: domain Description: PinE Location: 2284330-2284906 bp Feature: domain Description: Zn_ribbon_recom Location: 2285272-2285440 bp Feature: domain Description: Zn_ribbon_recom Location: 2285272-2285440 bp Feature: domain Description: HTH_MerR-trunc Location: 2286127-2286229 bp Feature: domain Description: HTH_MerR-trunc Location: 22861 27-2286229 bp Feature: domain Description: HTH_MerR-trunc Location: 2286343-2286457 bp Feature: domain Description: HTH_MerR-trunc Location: 2286343-2286457 bp Feature: gene Location: 2287612-2289054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2287933-2288620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2287933-2288620 bp Feature: domain Description: GIIM Note: maturase Location: 2288695-2288920 bp Feature: domain Description: GIIM Note: maturase Location: 2288695-2288920 bp Feature: gene Location: 2290420-2291664 bp Feature: domain Description: COG3547 Location: 2290594-2291521 bp Feature: domain Description: COG3547 Location: 2290594-2291 521 bp Feature: gene Location: 2291925-2292113 bp Feature: gene Location: 2395271-2395837 bp Feature: domain Description: mycofact_TetR Location: 2395295-2395823 bp Feature: domain Description: mycofact_TetR Location: 2395295-2395823 bp Feature: gene Location: 2395962-2397077 bp Feature: domain Description: COG3268 Location: 2396022-2397045 bp Feature: domain Description: COG3268 Location: 2396022-2397045 bp Feature: gene Location: 2397370-2397918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2397373-2397544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2397373-2397544 bp Feature: domain Description: GIIM Note: maturase Location: 2397622-2397841 bp Feature: domain Description: GIIM Note: maturase Location: 2397622-2397841 bp Feature: gene Location: 2398081-2399445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2398420-2399059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2398420-2399059 bp Feature: domain Description: GIIM Note: maturase Location: 2399137-2399362 bp Feature: domain Description: GIIM Note: maturase Location: 23991 37-2399362 bp Feature: gene Location: 2399974-2401515 bp Feature: domain Description: Resolvase Location: 2399980-2400211 bp Feature: domain Description: Resolvase Location: 2399980-240021 1 bp Feature: domain Description: Recombinase Location: 2400298-2400664 bp Feature: domain Description: Recombinase Location: 2400298-2400664 bp Feature: domain Description: Zn_ribbon_recom Location: 2400703-2400895 bp Feature: domain Description: Zn_ribbon_recom Location: 2400703-2400895 bp Feature: gene Location: 2401899-2402384 bp Feature: gene Location: 9646873-9647982 bp Feature: domain Description: InsQ Location: 9646900-9647971 bp Feature: domain Description: InsQ Location: 9646900-9647971 bp Feature: gene Location: 9648019-9648165 bp Feature: gene Location: 9648536-9649801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9648752-9649412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9648752-964941 2 bp Feature: domain Description: GIIM Note: maturase Location: 9649496-9649715 bp Feature: domain Description: GIIM Note: maturase Location: 9649496-964971 5 bp Feature: gene Location: 9649881-9650108 bp Feature: gene Location: 9650110-9650247 bp Feature: gene Location: 11608424-11608906 bp Feature: domain Description: DDE_Tnp_1 Location: 11608466-11608838 bp Feature: domain Description: DDE_Tnp_1 Location: 1 1 608466-1 1 608838 bp Feature: gene Location: 11608927-11609073 bp Feature: gene Location: 11609444-11610709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11609660-11610320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 609660-1 1 61 0320 bp Feature: domain Description: GIIM Note: maturase Location: 11610404-11610623 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 61 0404-1 1 61 0623 bp Feature: gene Location: 11611524-11612762 bp Feature: domain Description: Transposase_mut Location: 11611563-11612655 bp Feature: domain Description: Transposase_mut Location: 1 1 61 1 563-1 1 61 2655 bp Feature: gene Location: 11613160-11614317 bp Feature: domain Description: HTH_29 Location: 11613262-11613439 bp Feature: domain Description: HTH_29 Location: 1 1 61 3262-1 1 61 3439 bp Feature: domain Description: DDE_3 Location: 11613703-11614105 bp Feature: domain Description: DDE_3 Location: 1 1 61 3703-1 1 61 41 05 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RKQF01000002.1 (237859 bp)
Overview 1 RT 1: 121620-128520 bp Neighborhood of RT #1 [121620, 128520] DUF772 DDE_Tnp_1_6 DDE_5 RVT-GII GIIM COG3293 Feature: gene Location: 121620-123371 bp Feature: domain Description: DUF772 Location: 121824-122040 bp Feature: domain Description: DUF772 Location: 12 182 4-12 2 040 bp Feature: domain Description: DDE_Tnp_1_6 Location: 122877-123255 bp Feature: domain Description: DDE_Tnp_1_6 Location: 12 2 877-12 32 55 bp Feature: gene Location: 123440-124909 bp Feature: domain Description: DDE_5 Location: 123527-124319 bp Feature: domain Description: DDE_5 Location: 12 352 7-12 4319 bp Feature: gene Location: 125750-127015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125966-126626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 5966-12 662 6 bp Feature: domain Description: GIIM Note: maturase Location: 126710-126929 bp Feature: domain Description: GIIM Note: maturase Location: 12 6710-12 692 9 bp Feature: gene Location: 127613-128011 bp Feature: domain Description: COG3293 Location: 127619-127982 bp Feature: domain Description: COG32 93 Location: 12 7619-12 7982 bp Feature: gene Location: 128224-128520 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RKQF01000003.1 (122113 bp)
Overview 1 RT 1: 3973-8466 bp 2 RT 2: 64007-71943 bp Neighborhood of RT #1 [3973, 9047] PYR_PYL_RCAR_like DEDD_Tnp_IS110 Transposase_20 RVT-GII GIIM PHA02517 Nterm_IS4 DDE_Tnp_1 Neighborhood of RT #2 [64007, 71943] DUF4265 RVT-GII GIIM RVT-GII GIIM DEDD_Tnp_IS110 Feature: gene Location: 3973-4419 bp Feature: domain Description: PYR_PYL_RCAR_like Location: 4021-4399 bp Feature: domain Description: PYR_PYL_RCAR_like Location: 4021-43 99 bp Feature: gene Location: 4658-5872 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 4676-5144 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 4676-5144 bp Feature: domain Description: Transposase_20 Location: 5477-5732 bp Feature: domain Description: Transposase_20 Location: 5477-573 2 bp Feature: gene Location: 5922-6470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5928-6093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5928-6093 bp Feature: domain Description: GIIM Note: maturase Location: 6171-6405 bp Feature: domain Description: GIIM Note: maturase Location: 6171-6405 bp Feature: gene Location: 6588-7475 bp Feature: domain Description: PHA02517 Location: 6660-7452 bp Feature: domain Description: PHA02517 Location: 6660-7452 bp Feature: gene Location: 7521-9047 bp Feature: domain Description: Nterm_IS4 Location: 7527-7776 bp Feature: domain Description: Nterm_IS4 Location: 7527-7776 bp Feature: domain Description: DDE_Tnp_1 Location: 7902-8466 bp Feature: domain Description: DDE_Tnp_1 Location: 7902-8466 bp Feature: gene Location: 64007-64519 bp Feature: domain Description: DUF4265 Location: 64121-64481 bp Feature: domain Description: DUF4265 Location: 64121-64481 bp Feature: gene Location: 64549-64968 bp Feature: gene Location: 66219-67661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66540-67227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66540-67227 bp Feature: domain Description: GIIM Note: maturase Location: 67302-67527 bp Feature: domain Description: GIIM Note: maturase Location: 673 02-67527 bp Feature: gene Location: 68346-69776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68667-69354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68667-693 54 bp Feature: domain Description: GIIM Note: maturase Location: 69426-69654 bp Feature: domain Description: GIIM Note: maturase Location: 69426-69654 bp Feature: gene Location: 69912-70178 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 69918-70149 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 69918-70149 bp Feature: gene Location: 71032-71943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT