myRT

myRT report for GCA_003820085.1_ASM382008v1

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Seq: RPPN01000185.1 (2406 bp)
Overview 1 RT 1: 2-1912 bp Neighborhood of RT #1 [2, 1998] RVT-GII arc_metj Feature: gene Location: 2-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260-950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260-950 bp Feature: gene Location: 1163-1456 bp Feature: gene Location: 1774-1998 bp Feature: domain Description: arc_metj Location: 1783-1912 bp Feature: domain Description: arc_metj Location: 1 783-1 91 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, arc_metj (LOAD_arc_metj)

Seq: RPPN01000218.1 (2059 bp)
Overview 1 RT 1: 2-1976 bp Neighborhood of RT #1 [2, 1976] RVT-GII GIIM Feature: gene Location: 2-793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-407 bp Feature: domain Description: GIIM Note: maturase Location: 488-710 bp Feature: domain Description: GIIM Note: maturase Location: 488-710 bp Feature: gene Location: 854-1057 bp Feature: gene Location: 1203-1976 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RPPN01000722.1 (1662 bp)
Overview 1 RT 1: 3-1531 bp Neighborhood of RT #1 [3, 1531] RVT-GII Feature: gene Location: 3-950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 300-951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 00-951 bp Feature: gene Location: 1331-1531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RPPN01000442.1 (1817 bp)
Overview 1 RT 1: 3-1681 bp Neighborhood of RT #1 [3, 1731] RVT-GII GIIM RVT-GII Feature: gene Location: 3-533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-237 bp Feature: domain Description: GIIM Note: maturase Location: 309-498 bp Feature: domain Description: GIIM Note: maturase Location: 309-4 98 bp Feature: gene Location: 991-1731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1297-1681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1297-1681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RPPN01000401.1 (2341 bp)
Overview 1 RT 1: 11-2265 bp Neighborhood of RT #1 [11, 2339] GrpB RVT-GII GIIM Feature: gene Location: 11-535 bp Feature: domain Description: GrpB Location: 29-518 bp Feature: domain Description: GrpB Location: 29-5 18 bp Feature: gene Location: 942-2339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1377-1995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1377-1995 bp Feature: domain Description: GIIM Note: maturase Location: 2049-2265 bp Feature: domain Description: GIIM Note: maturase Location: 2049-2265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GrpB (pfam04229), RVT-GII, GIIM (pfam08388)

Seq: RPPN01000254.1 (1842 bp)
Overview 1 RT 1: 325-1555 bp Neighborhood of RT #1 [325, 1740] RVT-GII GIIM Feature: gene Location: 325-1740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 688-1303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 88-1303 bp Feature: domain Description: GIIM Note: maturase Location: 1351-1555 bp Feature: domain Description: GIIM Note: maturase Location: 1351-1555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RPPN01000066.1 (2216 bp)
Overview 1 RT 1: 82-1819 bp Neighborhood of RT #1 [82, 1819] RVT-GII GIIM Feature: gene Location: 82-1419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373-1030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37 3-1030 bp Feature: domain Description: GIIM Note: maturase Location: 1108-1315 bp Feature: domain Description: GIIM Note: maturase Location: 1108-1315 bp Feature: gene Location: 1562-1819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RPPN01000048.1 (2455 bp)
Overview 1 RT 1: 3-1911 bp Neighborhood of RT #1 [3, 2276] DUF5615 RVT-GII Feature: gene Location: 3-302 bp Feature: domain Description: DUF5615 Location: 6-159 bp Feature: domain Description: DUF5615 Location: 6-159 bp Feature: gene Location: 672-845 bp Feature: gene Location: 918-2276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1224-1911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1224-1911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5615 (pfam18480), RVT-GII

Seq: RPPN01000183.1 (2431 bp)
Overview 1 RT 1: 15-2358 bp Neighborhood of RT #1 [15, 2366] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 15-188 bp Feature: gene Location: 335-703 bp Feature: gene Location: 729-2366 bp Feature: domain Description: RVT_N Location: 774-1014 bp Feature: domain Description: RVT_N Location: 774-1014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1062-1698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1062-169 8 bp Feature: domain Description: GIIM Note: maturase Location: 1749-1983 bp Feature: domain Description: GIIM Note: maturase Location: 1749 -19 83 bp Feature: domain Description: HNHc Note: nucleases Location: 2211-2358 bp Feature: domain Description: HNHc Note: nucleases Location: 2211-2358 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: RPPN01000650.1 (2078 bp)
Overview 1 RT 1: 3-1742 bp Neighborhood of RT #1 [3, 1792] RVT-GII zf-TFIIB Feature: gene Location: 3-917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294-915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294-915 bp Feature: gene Location: 1017-1382 bp Feature: gene Location: 1490-1792 bp Feature: domain Description: zf-TFIIB Location: 1631-1742 bp Feature: domain Description: zf-TFIIB Location: 1631-1742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, zf-TFIIB (pfam13453)

Seq: RPPN01000184.1 (2421 bp)
Overview 1 RT 1: 220-2002 bp Neighborhood of RT #1 [220, 2145] RVT-GII GIIM Feature: gene Location: 220-546 bp Feature: gene Location: 614-808 bp Feature: gene Location: 839-1537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1109-1484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11 09-1484 bp Feature: gene Location: 1771-2145 bp Feature: domain Description: GIIM Note: maturase Location: 1774-2002 bp Feature: domain Description: GIIM Note: maturase Location: 1774-2002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RPPN01000333.1 (2019 bp)
Overview 1 RT 1: 208-2000 bp Neighborhood of RT #1 [208, 2017] RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66 Feature: gene Location: 208-1458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412-1069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412 -1069 bp Feature: domain Description: GIIM Note: maturase Location: 1150-1369 bp Feature: domain Description: GIIM Note: maturase Location: 1150-1369 bp Feature: gene Location: 1469-1678 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1544-1673 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1544-1673 bp Feature: gene Location: 1706-2017 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1709-2000 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1709-2000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)