myRT

myRT report for GCA_003833175.1_ASM383317v1

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Seq: RIBE01000019.1 (63509 bp)
Overview 1 RT 1: 9481-14200 bp Neighborhood of RT #1 [9481, 14200] WYL RVT-Retrons PRK11071 Feature: gene Location: 9481-10302 bp Feature: gene Location: 10302-11225 bp Feature: domain Description: WYL Location: 10674-11205 bp Feature: domain Description: WYL Location: 1 0674-1 1 205 bp Feature: gene Location: 11514-12626 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11736-12312 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 736-1 231 2 bp Feature: gene Location: 12623-13561 bp Feature: domain Description: PRK11071 Location: 12632-13004 bp Feature: domain Description: PRK1 1 071 Location: 1 2632-1 3004 bp Feature: gene Location: 13643-14200 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RIBE01000177.1 (921 bp)
Overview 1 RT 1: 3-624 bp Neighborhood of RT #1 [3, 920] RVT-DGRs Feature: gene Location: 3-920 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 18-624 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 18-62 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RIBE01000038.1 (27404 bp)
Overview 1 RT 1: 8060-20033 bp Neighborhood of RT #1 [8060, 20044] Por_Secre_tail COG4646 HELICc RVT-GII Intron_maturas2 PRK05399 COG4646 Feature: gene Location: 8060-11035 bp Feature: domain Description: Por_Secre_tail Location: 10856-11027 bp Feature: domain Description: Por_Secre_tail Location: 10856-11027 bp Feature: gene Location: 11501-14245 bp Feature: domain Description: COG4646 Location: 11633-12779 bp Feature: domain Description: COG4646 Location: 1163 3 -12779 bp Feature: domain Description: HELICc Location: 12860-13190 bp Feature: domain Description: HELICc Location: 12860-13 190 bp Feature: gene Location: 14211-16016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14475-15297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14475-15297 bp Feature: domain Description: Intron_maturas2 Location: 15375-15711 bp Feature: domain Description: Intron_maturas2 Location: 153 75-15711 bp Feature: gene Location: 16046-16399 bp Feature: gene Location: 16577-20044 bp Feature: domain Description: PRK05399 Location: 17807-18134 bp Feature: domain Description: PRK053 99 Location: 17807-1813 4 bp Feature: domain Description: COG4646 Location: 19127-20033 bp Feature: domain Description: COG4646 Location: 19127-2003 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RIBE01000127.1 (1582 bp)
Overview 1 RT 1: 2-1581 bp Neighborhood of RT #1 [2, 1581] RVT-DGRs Feature: gene Location: 2-868 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 305-845 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 305-84 5 bp Feature: gene Location: 1029-1232 bp Feature: gene Location: 1303-1581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RIBE01000037.1 (28610 bp)
Overview 1 RT 1: 21522-28125 bp Neighborhood of RT #1 [21522, 28391] YWFCY RVT_N RVT-GII GIIM RVT-GII Intron_maturas2 HNHc TraG-D_C Feature: gene Location: 21522-22232 bp Feature: domain Description: YWFCY Location: 21531-21708 bp Feature: domain Description: YWFCY Location: 215 31-21708 bp Feature: gene Location: 22389-22616 bp Feature: gene Location: 22848-24551 bp Feature: domain Description: RVT_N Location: 22920-23157 bp Feature: domain Description: RVT_N Location: 22920-2315 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23208-23862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23208-23862 bp Feature: domain Description: GIIM Note: maturase Location: 23913-24147 bp Feature: domain Description: GIIM Note: maturase Location: 23913-24147 bp Feature: gene Location: 24532-25092 bp Feature: gene Location: 25636-27453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25903-26725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 903-26725 bp Feature: domain Description: Intron_maturas2 Location: 26866-27103 bp Feature: domain Description: Intron_maturas2 Location: 26866-27103 bp Feature: domain Description: HNHc Note: nucleases Location: 27274-27424 bp Feature: domain Description: HNHc Note: nucleases Location: 27274-27424 bp Feature: gene Location: 27417-28391 bp Feature: domain Description: TraG-D_C Location: 27795-28125 bp Feature: domain Description: TraG-D_C Location: 27795 -28125 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RIBE01000022.1 (45973 bp)
Overview 1 RT 1: 1-8634 bp Neighborhood of RT #1 [1, 10373] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-DGRs Laminin_G_3 CotH LRR_AMN1 Feature: gene Location: 1-1275 bp Feature: domain Description: Arm-DNA-bind_5 Location: 154-385 bp Feature: domain Description: Arm-DNA-bind_5 Location: 154-385 bp Feature: domain Description: Phage_int_SAM_5 Location: 433-715 bp Feature: domain Description: Phage_int_SAM_5 Location: 433-715 bp Feature: domain Description: INTN1_C_like Location: 763-1237 bp Feature: domain Description: INTN1_C_like Location: 76 3-1237 bp Feature: gene Location: 1282-1728 bp Feature: gene Location: 1759-3192 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1978-2575 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1978-2575 bp Feature: gene Location: 3243-3590 bp Feature: gene Location: 3615-10373 bp Feature: domain Description: Laminin_G_3 Location: 6030-6459 bp Feature: domain Description: Laminin_G_3 Location: 6 030-6 459 bp Feature: domain Description: CotH Location: 7254-7569 bp Feature: domain Description: CotH Location: 7254-756 9 bp Feature: domain Description: LRR_AMN1 Location: 8154-8634 bp Feature: domain Description: LRR_AMN1 Location: 8154-86 34 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT