myRT

myRT report for GCA_003833305.1_ASM383330v1

Download annotations/find similar RTs

Seq: RPHD01000022.1 (41562 bp)
Overview 1 RT 1: 14332-19644 bp Neighborhood of RT #1 [14332, 19644] HTH_XRE RVT-UG19 TIR_2 Feature: gene Location: 14332-14775 bp Feature: domain Description: HTH_XRE Location: 14353-14524 bp Feature: domain Description: HTH_XRE Location: 1 4353-1 4524 bp Feature: gene Location: 15293-15430 bp Feature: gene Location: 16153-18063 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 16534-17008 bp Feature: RT Description: RVT-UG1 9 Note: UG1 9 RT Location: 1 6534-1 7008 bp Feature: gene Location: 18032-19246 bp Feature: domain Description: TIR_2 Location: 18440-18749 bp Feature: domain Description: TIR_2 Location: 1 8440-1 8749 bp Feature: gene Location: 19423-19644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-UG19, TIR_2 (pfam13676)

Seq: RPHD01000015.1 (89037 bp)
Overview 1 RT 1: 3461-9415 bp Neighborhood of RT #1 [3461, 9423] VOC_like Nudix_Hydrolase_18 RVT_N RVT-GII GIIM SASA HTH_BltR BltR2 Feature: gene Location: 3461-3895 bp Feature: domain Description: VOC_like Location: 3467-3821 bp Feature: domain Description: VOC_like Location: 3467-382 1 bp Feature: gene Location: 4328-4783 bp Feature: domain Description: Nudix_Hydrolase_18 Location: 4367-4742 bp Feature: domain Description: Nudix_Hydrolase_18 Location: 4367-4742 bp Feature: gene Location: 4991-6640 bp Feature: domain Description: RVT_N Location: 5039-5285 bp Feature: domain Description: RVT_N Location: 5039-52 85 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5339-5999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5339-5999 bp Feature: domain Description: GIIM Note: maturase Location: 6065-6299 bp Feature: domain Description: GIIM Note: maturase Location: 6065-62 99 bp Feature: gene Location: 7359-8195 bp Feature: domain Description: SASA Location: 7368-8031 bp Feature: domain Description: SASA Location: 7368-8031 bp Feature: gene Location: 8608-9423 bp Feature: domain Description: HTH_BltR Location: 8638-8920 bp Feature: domain Description: HTH_BltR Location: 8638-892 0 bp Feature: domain Description: BltR2 Location: 9217-9415 bp Feature: domain Description: BltR2 Location: 92 17-9415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VOC_like (cd16355), Nudix_Hydrolase_18 (cd04677), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), SASA (pfam03629), HTH_BltR (cd04782), BltR2 (COG4978)

Seq: RPHD01000036.1 (2832 bp)
Overview 1 RT 1: 518-1766 bp Neighborhood of RT #1 [518, 2566] RVT-GII Feature: gene Location: 518-706 bp Feature: gene Location: 713-2566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034-1766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 4-1766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RPHD01000035.1 (2931 bp)
Overview 1 RT 1: 106-2902 bp Neighborhood of RT #1 [106, 2928] RVT-GII GIIM RVT-GII GIIM RVT-GII Feature: gene Location: 106-852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112-211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112-211 bp Feature: domain Description: GIIM Note: maturase Location: 277-511 bp Feature: domain Description: GIIM Note: maturase Location: 277-511 bp Feature: gene Location: 968-2296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1256-1910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1256-1910 bp Feature: domain Description: GIIM Note: maturase Location: 1991-2219 bp Feature: domain Description: GIIM Note: maturase Location: 1991-2219 bp Feature: gene Location: 2731-2928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2743-2902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274 3-2902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RPHD01000041.1 (1343 bp)
Overview 1 RT 1: 388-1330 bp Neighborhood of RT #1 [388, 1341] RVT_N RVT-GII Feature: gene Location: 388-525 bp Feature: gene Location: 577-1341 bp Feature: domain Description: RVT_N Location: 661-904 bp Feature: domain Description: RVT_N Location: 661-904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 961-1330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 961-1330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII