myRT

myRT report for GCA_003833465.1_ASM383346v1

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Seq: NSMQ01000004.1 (572394 bp)
Overview 1 RT 1: 116990-122812 bp 2 RT 2: 482789-490038 bp Neighborhood of RT #1 [116990, 122829] clpP tig RVT_N RVT-GII GIIM HNH OmpR Neighborhood of RT #2 [482789, 490100] HxlR PRK06333 RVT-UG2 YHI9 STN TonB-siderophor Feature: gene Location: 116990-117631 bp Feature: domain Description: clpP Location: 117044-117620 bp Feature: domain Description: clpP Location: 1 1 7044-1 1 7620 bp Feature: gene Location: 117725-118993 bp Feature: domain Description: tig Location: 117728-118964 bp Feature: domain Description: tig Location: 1 1 7728-1 1 8964 bp Feature: gene Location: 119165-120868 bp Feature: domain Description: RVT_N Location: 119222-119465 bp Feature: domain Description: RVT_N Location: 1 1 9222-1 1 9465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119510-120146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 951 0-1 201 46 bp Feature: domain Description: GIIM Note: maturase Location: 120197-120431 bp Feature: domain Description: GIIM Note: maturase Location: 1 201 97-1 20431 bp Feature: domain Description: HNH Note: nucleases Location: 120683-120821 bp Feature: domain Description: HNH Note: nucleases Location: 1 20683-1 20821 bp Feature: gene Location: 120654-120788 bp Feature: gene Location: 122122-122829 bp Feature: domain Description: OmpR Location: 122146-122812 bp Feature: domain Description: OmpR Location: 1 221 46-1 2281 2 bp Feature: gene Location: 482789-483295 bp Feature: domain Description: HxlR Location: 482813-483131 bp Feature: domain Description: HxlR Location: 48281 3-4831 31 bp Feature: gene Location: 483404-484672 bp Feature: domain Description: PRK06333 Location: 483410-484667 bp Feature: domain Description: PRK06333 Location: 48341 0-484667 bp Feature: gene Location: 485171-486517 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 485420-486206 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 485420-486206 bp Feature: gene Location: 486701-487537 bp Feature: domain Description: YHI9 Location: 486713-487529 bp Feature: domain Description: YHI9 Location: 48671 3-487529 bp Feature: gene Location: 487698-490100 bp Feature: domain Description: STN Location: 487818-487971 bp Feature: domain Description: STN Location: 48781 8-487971 bp Feature: domain Description: TonB-siderophor Location: 488079-490038 bp Feature: domain Description: TonB-siderophor Location: 488079-490038 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT clpP, tig (TIGR00115), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), OmpR (COG0745), HxlR (pfam01638), PRK06333 (beta-ketoacyl-ACP synthase), RVT-UG2
YHI9 (COG0384), STN (smart00965), TonB-siderophor (TIGR01783)