myRT

myRT report for GCA_003833645.1_ASM383364v1

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Seq: NSNF01000010.1 (286525 bp)
Overview 1 RT 1: 270458-273010 bp Neighborhood of RT #1 [270458, 273033] IstB_IS21 TnpB_IS66 RVT-GII GIIM TnpB_IS66 Feature: gene Location: 270458-270736 bp Feature: domain Description: IstB_IS21 Location: 270476-270668 bp Feature: domain Description: IstB_IS21 Location: 270476-270668 bp Feature: gene Location: 270834-271058 bp Feature: domain Description: TnpB_IS66 Location: 270858-270951 bp Feature: domain Description: TnpB_IS66 Location: 270858-270951 bp Feature: gene Location: 271092-272360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271296-271953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271 296-271 953 bp Feature: domain Description: GIIM Note: maturase Location: 272031-272253 bp Feature: domain Description: GIIM Note: maturase Location: 272031 -272253 bp Feature: gene Location: 272872-273033 bp Feature: domain Description: TnpB_IS66 Location: 272902-273010 bp Feature: domain Description: TnpB_IS66 Location: 272902-27301 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IstB_IS21 (pfam01695), TnpB_IS66 (pfam05717), RVT-GII, GIIM (pfam08388)

Seq: NSNF01000016.1 (122810 bp)
Overview 1 RT 1: 538-2733 bp Neighborhood of RT #1 [538, 2733] RVT-GII GIIM Feature: gene Location: 538-1863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 799-1414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 799-1414 bp Feature: domain Description: GIIM Note: maturase Location: 1468-1696 bp Feature: domain Description: GIIM Note: maturase Location: 1468-1696 bp Feature: gene Location: 1991-2326 bp Feature: gene Location: 2410-2733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NSNF01000040.1 (2839 bp)
Overview 1 RT 1: 44-2643 bp Neighborhood of RT #1 [44, 2643] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 44-1777 bp Feature: domain Description: RVT_N Location: 104-347 bp Feature: domain Description: RVT_N Location: 104-3 47 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 395-1046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 95-1046 bp Feature: domain Description: GIIM Note: maturase Location: 1124-1352 bp Feature: domain Description: GIIM Note: maturase Location: 1124-13 52 bp Feature: domain Description: HNHc Note: nucleases Location: 1580-1736 bp Feature: domain Description: HNHc Note: nucleases Location: 1580-173 6 bp Feature: gene Location: 1952-2083 bp Feature: gene Location: 2410-2643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NSNF01000035.1 (12170 bp)
Overview 1 RT 1: 4001-8123 bp Neighborhood of RT #1 [4001, 8206] RVT-GII GIIM DUF772 ABC_phnC Feature: gene Location: 4001-4180 bp Feature: gene Location: 4364-4762 bp Feature: gene Location: 4912-6180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5125-5782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5125-5782 bp Feature: domain Description: GIIM Note: maturase Location: 5860-6082 bp Feature: domain Description: GIIM Note: maturase Location: 5860-6082 bp Feature: gene Location: 6569-7201 bp Feature: domain Description: DUF772 Location: 6710-6905 bp Feature: domain Description: DUF772 Location: 6710-6905 bp Feature: gene Location: 7379-8206 bp Feature: domain Description: ABC_phnC Location: 7409-8123 bp Feature: domain Description: ABC_phnC Location: 74 09-8123 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), ABC_phnC (TIGR02315)

Seq: NSNF01000001.1 (1100264 bp)
Overview 1 RT 1: 749187-759591 bp Neighborhood of RT #1 [749187, 759623] COG3177 YeeA RVT-UG5 YeeA RAYT Feature: gene Location: 749187-750665 bp Feature: domain Description: COG3177 Location: 749901-750378 bp Feature: domain Description: COG3177 Location: 749901-75 0378 bp Feature: gene Location: 750804-752747 bp Feature: domain Description: YeeA Location: 751449-752661 bp Feature: domain Description: YeeA Location: 75 1449-75 2661 bp Feature: gene Location: 752747-755785 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 753239-753725 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 75 3239-75 3725 bp Feature: gene Location: 755782-757566 bp Feature: domain Description: YeeA Location: 755821-757501 bp Feature: domain Description: YeeA Location: 75 5 821-75 75 01 bp Feature: gene Location: 759192-759623 bp Feature: domain Description: RAYT Location: 759198-759591 bp Feature: domain Description: RAYT Location: 75 9198-75 95 91 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), YeeA (COG1002), RVT-UG5, RAYT (COG1943)