myRT

myRT report for GCA_003833765.1_ASM383376v1

Download annotations/find similar RTs

Seq: NSNQ01000008.1 (414190 bp)
Overview 1 RT 1: 49899-58757 bp 2 RT 2: 75026-85323 bp Neighborhood of RT #1 [49899, 58765] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [75026, 85334] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 49899-50573 bp Feature: domain Description: NTP_transferase_like_1 Location: 49905-50544 bp Feature: domain Description: NTP_transferase_like_1 Location: 49905-50544 bp Feature: gene Location: 50570-51586 bp Feature: domain Description: COG3178 Location: 50573-51572 bp Feature: domain Description: COG31 78 Location: 50573-51 572 bp Feature: gene Location: 52858-54570 bp Feature: domain Description: RVT_N Location: 52915-53158 bp Feature: domain Description: RVT_N Location: 5291 5-531 58 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53203-53839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53203-53839 bp Feature: domain Description: YkfC Location: 54049-54199 bp Feature: domain Description: YkfC Location: 54049-541 99 bp Feature: domain Description: HNH Note: nucleases Location: 54376-54514 bp Feature: domain Description: HNH Note: nucleases Location: 54376-5451 4 bp Feature: gene Location: 54703-57492 bp Feature: domain Description: LptD Location: 54898-57478 bp Feature: domain Description: LptD Location: 54898-57478 bp Feature: gene Location: 57551-58765 bp Feature: domain Description: PRK10770 Location: 57563-58757 bp Feature: domain Description: PRK1 0770 Location: 57563-58757 bp Feature: gene Location: 75026-76879 bp Feature: domain Description: PRK05658 Location: 75038-76877 bp Feature: domain Description: PRK05658 Location: 75038-76877 bp Feature: gene Location: 76986-80723 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 77094-77751 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 77094-77751 bp Feature: domain Description: PRK09776 Location: 77964-78435 bp Feature: domain Description: PRK09776 Location: 77964-78435 bp Feature: domain Description: PAS Location: 78525-79017 bp Feature: domain Description: PAS Location: 78525-7901 7 bp Feature: domain Description: PRK10060 Location: 79026-80673 bp Feature: domain Description: PRK1 0060 Location: 79026-80673 bp Feature: gene Location: 81804-83489 bp Feature: domain Description: RVT_N Location: 81861-82101 bp Feature: domain Description: RVT_N Location: 81 861 -821 01 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82149-82785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 821 49-82785 bp Feature: domain Description: GIIM Note: maturase Location: 82839-83070 bp Feature: domain Description: GIIM Note: maturase Location: 82839-83070 bp Feature: domain Description: HNH Note: nucleases Location: 83322-83460 bp Feature: domain Description: HNH Note: nucleases Location: 83322-83460 bp Feature: gene Location: 83817-83954 bp Feature: gene Location: 84213-85334 bp Feature: domain Description: COG3177 Location: 84231-85323 bp Feature: domain Description: COG31 77 Location: 84231 -85323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein )

Seq: NSNQ01000018.1 (69370 bp)
Overview 1 RT 1: 26921-29073 bp Neighborhood of RT #1 [26921, 29606] HipB RVT-UG17 Feature: gene Location: 26921-27202 bp Feature: domain Description: HipB Location: 26942-27176 bp Feature: domain Description: HipB Location: 2 6942 -2 7176 bp Feature: gene Location: 27288-27713 bp Feature: gene Location: 28242-29606 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 28470-29073 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 8470-2 9073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HipB (COG1396), RVT-UG17

Seq: NSNQ01000004.1 (649936 bp)
Overview 1 RT 1: 644108-649637 bp Neighborhood of RT #1 [644108, 649933] CHD CHD RVT-GII GIIM DUF772 Feature: gene Location: 644108-645652 bp Feature: domain Description: CHD Location: 644324-644738 bp Feature: domain Description: CHD Location: 6443 24-64473 8 bp Feature: domain Description: CHD Location: 644966-645455 bp Feature: domain Description: CHD Location: 644966-645455 bp Feature: gene Location: 646736-646915 bp Feature: gene Location: 647647-648915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 647860-648517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 647860-648517 bp Feature: domain Description: GIIM Note: maturase Location: 648595-648817 bp Feature: domain Description: GIIM Note: maturase Location: 648595-648817 bp Feature: gene Location: 649304-649933 bp Feature: domain Description: DUF772 Location: 649442-649637 bp Feature: domain Description: DUF772 Location: 649442-64963 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598)