myRT

myRT report for GCA_003834165.1_ASM383416v1

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Seq: NSOD01000006.1 (418841 bp)
Overview 1 RT 1: 278873-286020 bp Neighborhood of RT #1 [278873, 286184] STN TonB-siderophor YHI9 RVT-UG2 PRK06333 HxlR Feature: gene Location: 278873-281275 bp Feature: domain Description: STN Location: 278993-279140 bp Feature: domain Description: STN Location: 278993-2791 40 bp Feature: domain Description: TonB-siderophor Location: 279254-281213 bp Feature: domain Description: TonB-siderophor Location: 279254-281 21 3 bp Feature: gene Location: 281436-282272 bp Feature: domain Description: YHI9 Location: 281448-282264 bp Feature: domain Description: YHI9 Location: 281 448-282264 bp Feature: gene Location: 282456-283802 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 282705-283491 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 282705-283491 bp Feature: gene Location: 284301-285569 bp Feature: domain Description: PRK06333 Location: 284307-285564 bp Feature: domain Description: PRK06333 Location: 284307-285564 bp Feature: gene Location: 285678-286184 bp Feature: domain Description: HxlR Location: 285702-286020 bp Feature: domain Description: HxlR Location: 285702-286020 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STN (smart00965), TonB-siderophor (TIGR01783), YHI9 (COG0384), RVT-UG2, PRK06333 (beta-ketoacyl-ACP synthase), HxlR (pfam01638)

Seq: NSOD01000005.1 (422548 bp)
Overview 1 RT 1: 49917-58776 bp 2 RT 2: 75040-85337 bp Neighborhood of RT #1 [49917, 58784] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [75040, 85348] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 49917-50591 bp Feature: domain Description: NTP_transferase_like_1 Location: 49923-50562 bp Feature: domain Description: NTP_transferase_like_1 Location: 4992 3-50562 bp Feature: gene Location: 50588-51604 bp Feature: domain Description: COG3178 Location: 50591-51590 bp Feature: domain Description: COG3178 Location: 50591-51590 bp Feature: gene Location: 52877-54589 bp Feature: domain Description: RVT_N Location: 52934-53177 bp Feature: domain Description: RVT_N Location: 52 934-53177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53222-53858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532 2 2 -53858 bp Feature: domain Description: YkfC Location: 54065-54218 bp Feature: domain Description: YkfC Location: 54065-542 18 bp Feature: domain Description: HNH Note: nucleases Location: 54395-54533 bp Feature: domain Description: HNH Note: nucleases Location: 54395-54533 bp Feature: gene Location: 54722-57511 bp Feature: domain Description: LptD Location: 54917-57497 bp Feature: domain Description: LptD Location: 54917-57497 bp Feature: gene Location: 57570-58784 bp Feature: domain Description: PRK10770 Location: 57582-58776 bp Feature: domain Description: PRK10770 Location: 57582 -58776 bp Feature: gene Location: 75040-76893 bp Feature: domain Description: PRK05658 Location: 75052-76891 bp Feature: domain Description: PRK05658 Location: 75052 -76891 bp Feature: gene Location: 77000-80737 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 77108-77765 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 77108-77765 bp Feature: domain Description: PRK09776 Location: 77978-78449 bp Feature: domain Description: PRK09776 Location: 77978-78449 bp Feature: domain Description: PAS Location: 78521-79031 bp Feature: domain Description: PAS Location: 7852 1-79031 bp Feature: domain Description: PRK10060 Location: 79040-80687 bp Feature: domain Description: PRK10060 Location: 79040-80687 bp Feature: gene Location: 81818-83503 bp Feature: domain Description: RVT_N Location: 81875-82115 bp Feature: domain Description: RVT_N Location: 81875-82 115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82163-82799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 163-82 799 bp Feature: domain Description: GIIM Note: maturase Location: 82853-83084 bp Feature: domain Description: GIIM Note: maturase Location: 82 853-83084 bp Feature: domain Description: HNH Note: nucleases Location: 83336-83474 bp Feature: domain Description: HNH Note: nucleases Location: 83336-83474 bp Feature: gene Location: 83831-83968 bp Feature: gene Location: 84227-85348 bp Feature: domain Description: COG3177 Location: 84245-85337 bp Feature: domain Description: COG3177 Location: 842 45-85337 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein )