myRT

myRT report for GCA_003834985.1_ASM383498v1

Download annotations/find similar RTs

Seq: NSQO01000003.1 (559852 bp)
Overview 1 RT 1: 556912-559322 bp Neighborhood of RT #1 [556912, 559324] DDE_Tnp_1 RVT-GII Feature: gene Location: 556912-557130 bp Feature: gene Location: 557758-558291 bp Feature: domain Description: DDE_Tnp_1 Location: 557782-558241 bp Feature: domain Description: DDE_Tnp_1 Location: 557782-558241 bp Feature: gene Location: 558518-559324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 558731-559322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 558731 -559322 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII

Seq: NSQO01000004.1 (452813 bp)
Overview 1 RT 1: 49776-58635 bp Neighborhood of RT #1 [49776, 58643] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 49776-50450 bp Feature: domain Description: NTP_transferase_like_1 Location: 49782-50421 bp Feature: domain Description: NTP_transferase_like_1 Location: 49782 -5042 1 bp Feature: gene Location: 50447-51463 bp Feature: domain Description: COG3178 Location: 50450-51449 bp Feature: domain Description: COG3178 Location: 50450-51449 bp Feature: gene Location: 52736-54448 bp Feature: domain Description: RVT_N Location: 52793-53036 bp Feature: domain Description: RVT_N Location: 52 793-53036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53081-53717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53081-53717 bp Feature: domain Description: YkfC Location: 53927-54077 bp Feature: domain Description: YkfC Location: 5392 7-54077 bp Feature: domain Description: HNH Note: nucleases Location: 54254-54392 bp Feature: domain Description: HNH Note: nucleases Location: 542 54-54392 bp Feature: gene Location: 54581-57370 bp Feature: domain Description: LptD Location: 54776-57356 bp Feature: domain Description: LptD Location: 54776-57356 bp Feature: gene Location: 57429-58643 bp Feature: domain Description: PRK10770 Location: 57441-58635 bp Feature: domain Description: PRK10770 Location: 57441-58635 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: NSQO01000024.1 (52135 bp)
Overview 1 RT 1: 27595-31324 bp Neighborhood of RT #1 [27595, 31324] RVT-UG17 SLATT_5 Feature: gene Location: 27595-28020 bp Feature: gene Location: 28037-28507 bp Feature: gene Location: 28549-29913 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 28777-29380 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 28777-293 80 bp Feature: gene Location: 29910-30452 bp Feature: domain Description: SLATT_5 Location: 29916-30426 bp Feature: domain Description: SLATT_5 Location: 29916-3 0426 bp Feature: gene Location: 31190-31324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)