myRT

myRT report for GCA_003835095.1_ASM383509v1

Download annotations/find similar RTs

Seq: NSQU01000013.1 (129825 bp)
Overview 1 RT 1: 123997-129526 bp Neighborhood of RT #1 [123997, 129822] CHD CHD RVT-GII GIIM DUF772 Feature: gene Location: 123997-125541 bp Feature: domain Description: CHD Location: 124213-124627 bp Feature: domain Description: CHD Location: 1 2421 3-1 24627 bp Feature: domain Description: CHD Location: 124855-125344 bp Feature: domain Description: CHD Location: 1 24855-1 25344 bp Feature: gene Location: 126625-126804 bp Feature: gene Location: 127536-128804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127749-128406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 27749-1 28406 bp Feature: domain Description: GIIM Note: maturase Location: 128484-128706 bp Feature: domain Description: GIIM Note: maturase Location: 1 28484-1 28706 bp Feature: gene Location: 129193-129822 bp Feature: domain Description: DUF772 Location: 129331-129526 bp Feature: domain Description: DUF772 Location: 1 29331 -1 29526 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598)

Seq: NSQU01000005.1 (917285 bp)
Overview 1 RT 1: 49918-58777 bp 2 RT 2: 75041-85338 bp Neighborhood of RT #1 [49918, 58785] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [75041, 85349] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 49918-50592 bp Feature: domain Description: NTP_transferase_like_1 Location: 49924-50563 bp Feature: domain Description: NTP_transferase_like_1 Location: 4992 4-50563 bp Feature: gene Location: 50589-51605 bp Feature: domain Description: COG3178 Location: 50592-51591 bp Feature: domain Description: COG3178 Location: 50592 -51591 bp Feature: gene Location: 52878-54590 bp Feature: domain Description: RVT_N Location: 52935-53178 bp Feature: domain Description: RVT_N Location: 52 935-53178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53223-53859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532 2 3-53859 bp Feature: domain Description: YkfC Location: 54069-54219 bp Feature: domain Description: YkfC Location: 54069-542 19 bp Feature: domain Description: HNH Note: nucleases Location: 54396-54534 bp Feature: domain Description: HNH Note: nucleases Location: 54396-54534 bp Feature: gene Location: 54723-57512 bp Feature: domain Description: LptD Location: 54918-57498 bp Feature: domain Description: LptD Location: 54918-57498 bp Feature: gene Location: 57571-58785 bp Feature: domain Description: PRK10770 Location: 57583-58777 bp Feature: domain Description: PRK10770 Location: 57583-58777 bp Feature: gene Location: 75041-76894 bp Feature: domain Description: PRK05658 Location: 75053-76892 bp Feature: domain Description: PRK05658 Location: 75053-76892 bp Feature: gene Location: 77001-80738 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 77109-77766 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 77109-77766 bp Feature: domain Description: PRK09776 Location: 77979-78450 bp Feature: domain Description: PRK09776 Location: 77979-78450 bp Feature: domain Description: PAS Location: 78540-79032 bp Feature: domain Description: PAS Location: 78540-79032 bp Feature: domain Description: PRK10060 Location: 79041-80688 bp Feature: domain Description: PRK10060 Location: 79041-80688 bp Feature: gene Location: 81819-83504 bp Feature: domain Description: RVT_N Location: 81876-82116 bp Feature: domain Description: RVT_N Location: 81876-82 116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82164-82800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 164-82 800 bp Feature: domain Description: GIIM Note: maturase Location: 82854-83085 bp Feature: domain Description: GIIM Note: maturase Location: 82 854-83085 bp Feature: domain Description: HNH Note: nucleases Location: 83337-83475 bp Feature: domain Description: HNH Note: nucleases Location: 83337-83475 bp Feature: gene Location: 83832-83969 bp Feature: gene Location: 84228-85349 bp Feature: domain Description: COG3177 Location: 84246-85338 bp Feature: domain Description: COG3177 Location: 842 46-85338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein )

Seq: NSQU01000022.1 (64746 bp)
Overview 1 RT 1: 27406-29558 bp Neighborhood of RT #1 [27406, 30091] HipB RVT-UG17 Feature: gene Location: 27406-27687 bp Feature: domain Description: HipB Location: 27427-27661 bp Feature: domain Description: HipB Location: 27427-27661 bp Feature: gene Location: 27773-28198 bp Feature: gene Location: 28727-30091 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 28955-29558 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 28955-29558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HipB (COG1396), RVT-UG17