myRT

myRT report for GCA_003836605.1_ASM383660v1

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Seq: NSTV01000004.1 (783966 bp)
Overview 1 RT 1: 368915-376152 bp Neighborhood of RT #1 [368915, 376214] HxlR PRK06333 RVT-UG2 YHI9 STN TonB-siderophor Feature: gene Location: 368915-369421 bp Feature: domain Description: HxlR Location: 368939-369257 bp Feature: domain Description: HxlR Location: 368939-369257 bp Feature: gene Location: 369530-370798 bp Feature: domain Description: PRK06333 Location: 369536-370793 bp Feature: domain Description: PRK06333 Location: 369536-370793 bp Feature: gene Location: 371505-372644 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 371547-372333 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 371 547-372333 bp Feature: gene Location: 372816-373652 bp Feature: domain Description: YHI9 Location: 372828-373644 bp Feature: domain Description: YHI9 Location: 372828-373644 bp Feature: gene Location: 373812-376214 bp Feature: domain Description: STN Location: 373932-374085 bp Feature: domain Description: STN Location: 373932-374085 bp Feature: domain Description: TonB-siderophor Location: 374193-376152 bp Feature: domain Description: TonB-siderophor Location: 3741 93-3761 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HxlR (pfam01638), PRK06333 (beta-ketoacyl-ACP synthase), RVT-UG2, YHI9 (COG0384), STN (smart00965), TonB-siderophor (TIGR01783)

Seq: NSTV01000003.1 (627437 bp)
Overview 1 RT 1: 594126-604434 bp 2 RT 2: 620693-626840 bp Neighborhood of RT #1 [594126, 604436] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #2 [620693, 626896] PRK10770 LptD RVT_N RVT-GII YkfC HNH Feature: gene Location: 594126-595247 bp Feature: domain Description: COG3177 Location: 594144-595236 bp Feature: domain Description: COG3177 Location: 594144-5952 36 bp Feature: gene Location: 595509-595670 bp Feature: gene Location: 595973-597658 bp Feature: domain Description: RVT_N Location: 596030-596270 bp Feature: domain Description: RVT_N Location: 596030-5962 70 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 596318-596954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 596318-596954 bp Feature: domain Description: GIIM Note: maturase Location: 597008-597239 bp Feature: domain Description: GIIM Note: maturase Location: 597008-5972 39 bp Feature: domain Description: HNH Note: nucleases Location: 597491-597629 bp Feature: domain Description: HNH Note: nucleases Location: 597491-59762 9 bp Feature: gene Location: 598739-602476 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 598847-599504 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 598847-599504 bp Feature: domain Description: PRK09776 Location: 599717-600188 bp Feature: domain Description: PRK09776 Location: 599717-600188 bp Feature: domain Description: PAS Location: 600245-600770 bp Feature: domain Description: PAS Location: 6002 45-600770 bp Feature: domain Description: PRK10060 Location: 600779-602426 bp Feature: domain Description: PRK10060 Location: 600779-602 42 6 bp Feature: gene Location: 602583-604436 bp Feature: domain Description: PRK05658 Location: 602595-604434 bp Feature: domain Description: PRK05658 Location: 602 595-604434 bp Feature: gene Location: 620693-621907 bp Feature: domain Description: PRK10770 Location: 620705-621899 bp Feature: domain Description: PRK10770 Location: 62 0705-62 1899 bp Feature: gene Location: 621966-624752 bp Feature: domain Description: LptD Location: 622161-624738 bp Feature: domain Description: LptD Location: 62 2 161-62 4738 bp Feature: gene Location: 625184-626896 bp Feature: domain Description: RVT_N Location: 625241-625484 bp Feature: domain Description: RVT_N Location: 62 52 41-62 5484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 625529-626162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 552 9-62 6162 bp Feature: domain Description: YkfC Location: 626375-626525 bp Feature: domain Description: YkfC Location: 62 6375-62 652 5 bp Feature: domain Description: HNH Note: nucleases Location: 626702-626840 bp Feature: domain Description: HNH Note: nucleases Location: 62 6702 -62 6840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)
PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), YkfC (COG3344)