myRT

myRT report for GCA_003837325.1_ASM383732v1

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Seq: NSTF01000002.1 (551631 bp)
Overview 1 RT 1: 547538-551630 bp Neighborhood of RT #1 [547538, 551630] HxlR PRK06333 RVT-UG2 Feature: gene Location: 547538-548044 bp Feature: domain Description: HxlR Location: 547562-547880 bp Feature: domain Description: HxlR Location: 547562-547880 bp Feature: gene Location: 548153-549421 bp Feature: domain Description: PRK06333 Location: 548159-549416 bp Feature: domain Description: PRK06333 Location: 5481 59-54941 6 bp Feature: gene Location: 549920-551266 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 550169-550955 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 5501 69-550955 bp Feature: gene Location: 551499-551630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HxlR (pfam01638), PRK06333 (beta-ketoacyl-ACP synthase), RVT-UG2

Seq: NSTF01000001.1 (857501 bp)
Overview 1 RT 1: 851673-857202 bp Neighborhood of RT #1 [851673, 857498] CHD CHD RVT-GII GIIM DUF772 Feature: gene Location: 851673-853217 bp Feature: domain Description: CHD Location: 851889-852303 bp Feature: domain Description: CHD Location: 851889-852 303 bp Feature: domain Description: CHD Location: 852531-853020 bp Feature: domain Description: CHD Location: 852 531-85302 0 bp Feature: gene Location: 854301-854480 bp Feature: gene Location: 855212-856480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 855425-856082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85542 5-856082 bp Feature: domain Description: GIIM Note: maturase Location: 856160-856382 bp Feature: domain Description: GIIM Note: maturase Location: 856160-856382 bp Feature: gene Location: 856869-857498 bp Feature: domain Description: DUF772 Location: 857007-857202 bp Feature: domain Description: DUF772 Location: 857007-8572 02 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598)

Seq: NSTF01000016.1 (133387 bp)
Overview 1 RT 1: 48314-58620 bp 2 RT 2: 74878-83716 bp Neighborhood of RT #1 [48314, 58622] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #2 [74878, 83745] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 48314-49435 bp Feature: domain Description: COG3177 Location: 48332-49424 bp Feature: domain Description: COG3 177 Location: 483 3 2-49424 bp Feature: gene Location: 49694-49831 bp Feature: gene Location: 50159-51844 bp Feature: domain Description: RVT_N Location: 50216-50456 bp Feature: domain Description: RVT_N Location: 50216-50456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50504-51140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50504-51140 bp Feature: domain Description: GIIM Note: maturase Location: 51194-51425 bp Feature: domain Description: GIIM Note: maturase Location: 51194-51425 bp Feature: domain Description: HNH Note: nucleases Location: 51677-51815 bp Feature: domain Description: HNH Note: nucleases Location: 51677-51815 bp Feature: gene Location: 52925-56662 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 53033-53690 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 53 03 3 -53 690 bp Feature: domain Description: PRK09776 Location: 53903-54374 bp Feature: domain Description: PRK09776 Location: 53 903 -543 74 bp Feature: domain Description: PAS Location: 54416-54956 bp Feature: domain Description: PAS Location: 54416-54956 bp Feature: domain Description: PRK10060 Location: 54965-56612 bp Feature: domain Description: PRK10060 Location: 54965-56612 bp Feature: gene Location: 56769-58622 bp Feature: domain Description: PRK05658 Location: 56781-58620 bp Feature: domain Description: PRK05658 Location: 56781-58620 bp Feature: gene Location: 74878-76092 bp Feature: domain Description: PRK10770 Location: 74890-76084 bp Feature: domain Description: PRK10770 Location: 74890-76084 bp Feature: gene Location: 76151-78940 bp Feature: domain Description: LptD Location: 76346-78926 bp Feature: domain Description: LptD Location: 763 46-78926 bp Feature: gene Location: 79073-80785 bp Feature: domain Description: RVT_N Location: 79130-79373 bp Feature: domain Description: RVT_N Location: 7913 0-793 73 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79418-80054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79418-80054 bp Feature: domain Description: YkfC Location: 80264-80414 bp Feature: domain Description: YkfC Location: 80264-80414 bp Feature: domain Description: HNH Note: nucleases Location: 80591-80729 bp Feature: domain Description: HNH Note: nucleases Location: 80591-80729 bp Feature: gene Location: 82058-83074 bp Feature: domain Description: COG3178 Location: 82061-83060 bp Feature: domain Description: COG3 178 Location: 82061-83 060 bp Feature: gene Location: 83071-83745 bp Feature: domain Description: NTP_transferase_like_1 Location: 83077-83716 bp Feature: domain Description: NTP_transferase_like_1 Location: 83 077-83 716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)
PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), YkfC (COG3344), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)