myRT

myRT report for GCA_003837585.1_ASM383758v1

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Seq: NSUK01000034.1 (36464 bp)
Overview 1 RT 1: 2046-9357 bp Neighborhood of RT #1 [2046, 10412] AAA_21 AAA_21 RVT-UG5 YeeA DUF262 Feature: gene Location: 2046-3185 bp Feature: domain Description: AAA_21 Location: 2118-2187 bp Feature: domain Description: AAA_21 Location: 21 1 8-21 87 bp Feature: domain Description: AAA_21 Location: 2661-2991 bp Feature: domain Description: AAA_21 Location: 2661 -2991 bp Feature: gene Location: 3185-3742 bp Feature: gene Location: 3739-6759 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4234-4705 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4234-4705 bp Feature: gene Location: 6756-8537 bp Feature: domain Description: YeeA Location: 7623-8403 bp Feature: domain Description: YeeA Location: 7623-8403 bp Feature: gene Location: 8541-10412 bp Feature: domain Description: DUF262 Location: 8589-9357 bp Feature: domain Description: DUF262 Location: 8589-9357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-UG5, YeeA (COG1002), DUF262 (pfam03235)

Seq: NSUK01000010.1 (265174 bp)
Overview 1 RT 1: 254488-261127 bp Neighborhood of RT #1 [254488, 261210] CHD CHD RVT-GII GIIM DUF772 ABC_phnC Feature: gene Location: 254488-256032 bp Feature: domain Description: CHD Location: 254704-255118 bp Feature: domain Description: CHD Location: 2 54704-2 55118 bp Feature: domain Description: CHD Location: 255346-255835 bp Feature: domain Description: CHD Location: 2 55346-2 55835 bp Feature: gene Location: 257116-257295 bp Feature: gene Location: 258027-259295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258240-258897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 582 40-2 58897 bp Feature: domain Description: GIIM Note: maturase Location: 258975-259197 bp Feature: domain Description: GIIM Note: maturase Location: 2 58975-2 59197 bp Feature: gene Location: 259684-260316 bp Feature: domain Description: DUF772 Location: 259825-260020 bp Feature: domain Description: DUF772 Location: 2 5982 5-2 6002 0 bp Feature: gene Location: 260383-261210 bp Feature: domain Description: ABC_phnC Location: 260413-261127 bp Feature: domain Description: ABC_phnC Location: 2 60413-2 6112 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), ABC_phnC (TIGR02315)

Seq: NSUK01000008.1 (274578 bp)
Overview 1 RT 1: 93356-98937 bp Neighborhood of RT #1 [93356, 98942] SdhE RVT-GII YkfC HNH YgfZ HDOD Feature: gene Location: 93356-93550 bp Feature: gene Location: 93689-93943 bp Feature: domain Description: SdhE Location: 93695-93935 bp Feature: domain Description: SdhE Location: 93 695-93 93 5 bp Feature: gene Location: 94019-95338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94022-94598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94022-94598 bp Feature: domain Description: YkfC Location: 94796-94952 bp Feature: domain Description: YkfC Location: 94796-94952 bp Feature: domain Description: HNH Note: nucleases Location: 95135-95273 bp Feature: domain Description: HNH Note: nucleases Location: 9513 5-95273 bp Feature: gene Location: 97061-98005 bp Feature: domain Description: YgfZ Location: 97070-97970 bp Feature: domain Description: YgfZ Location: 97070-97970 bp Feature: gene Location: 98106-98942 bp Feature: domain Description: HDOD Location: 98109-98937 bp Feature: domain Description: HDOD Location: 98109-9893 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SdhE (COG2938), RVT-GII, YkfC (COG3344), HNH (pfam01844), YgfZ (COG0354), HDOD (pfam08668)

Seq: NSUK01000004.1 (471017 bp)
Overview 1 RT 1: 49563-58404 bp 2 RT 2: 74668-88589 bp Neighborhood of RT #1 [49563, 58412] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74668, 88744] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 IMPa_N_2 IMPa_helical Peptidase_M60 Feature: gene Location: 49563-50237 bp Feature: domain Description: NTP_transferase_like_1 Location: 49569-50208 bp Feature: domain Description: NTP_transferase_like_1 Location: 4 9569-50208 bp Feature: gene Location: 50234-51250 bp Feature: domain Description: COG3178 Location: 50237-51236 bp Feature: domain Description: COG3178 Location: 50237-51236 bp Feature: gene Location: 52523-54235 bp Feature: domain Description: RVT_N Location: 52580-52823 bp Feature: domain Description: RVT_N Location: 52580-52823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52868-53504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52868-53504 bp Feature: domain Description: YkfC Location: 53714-53864 bp Feature: domain Description: YkfC Location: 53714 -53864 bp Feature: domain Description: HNH Note: nucleases Location: 54041-54179 bp Feature: domain Description: HNH Note: nucleases Location: 54 04 1-54 179 bp Feature: gene Location: 54368-57139 bp Feature: domain Description: LptD Location: 54563-57125 bp Feature: domain Description: LptD Location: 54 563-57125 bp Feature: gene Location: 57198-58412 bp Feature: domain Description: PRK10770 Location: 57210-58404 bp Feature: domain Description: PRK10770 Location: 57210-584 04 bp Feature: gene Location: 74668-76521 bp Feature: domain Description: PRK05658 Location: 74680-76519 bp Feature: domain Description: PRK05658 Location: 74 680-76519 bp Feature: gene Location: 76628-80365 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76736-77393 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76736-77393 bp Feature: domain Description: PRK09776 Location: 77606-78077 bp Feature: domain Description: PRK09776 Location: 77606-78077 bp Feature: domain Description: PAS Location: 78134-78659 bp Feature: domain Description: PAS Location: 78134 -78659 bp Feature: domain Description: PRK10060 Location: 78671-80315 bp Feature: domain Description: PRK10060 Location: 78671-80315 bp Feature: gene Location: 81446-83131 bp Feature: domain Description: RVT_N Location: 81503-81743 bp Feature: domain Description: RVT_N Location: 81503-8174 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81791-82427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81791-824 27 bp Feature: domain Description: GIIM Note: maturase Location: 82481-82712 bp Feature: domain Description: GIIM Note: maturase Location: 824 81-82712 bp Feature: domain Description: HNH Note: nucleases Location: 82964-83102 bp Feature: domain Description: HNH Note: nucleases Location: 82964 -83102 bp Feature: gene Location: 83854-84975 bp Feature: domain Description: COG3177 Location: 83872-84964 bp Feature: domain Description: COG3177 Location: 83872-84 964 bp Feature: gene Location: 86018-88744 bp Feature: domain Description: IMPa_N_2 Location: 86225-86807 bp Feature: domain Description: IMPa_N_2 Location: 86225-86807 bp Feature: domain Description: IMPa_helical Location: 86888-87215 bp Feature: domain Description: IMPa_helical Location: 86888-87215 bp Feature: domain Description: Peptidase_M60 Location: 87659-88589 bp Feature: domain Description: Peptidase_M60 Location: 87659-88589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein ), IMPa_N_2 (pfam18650), IMPa_helical (pfam18642), Peptidase_M60 (pfam13402)