myRT

myRT report for GCA_003838895.1_ASM383889v1

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Seq: NSWL01000015.1 (120137 bp)
Overview 1 RT 1: 65789-71195 bp Neighborhood of RT #1 [65789, 71200] PRK00024 RVT_N RVT-GII GIIM HNHc PRK05579 dut Feature: gene Location: 65789-66463 bp Feature: domain Description: PRK00024 Location: 65792-66461 bp Feature: domain Description: PRK00024 Location: 65792-66461 bp Feature: gene Location: 67281-67409 bp Feature: gene Location: 67635-69317 bp Feature: domain Description: RVT_N Location: 67644-67887 bp Feature: domain Description: RVT_N Location: 67644-67887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67935-68586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67935-68586 bp Feature: domain Description: GIIM Note: maturase Location: 68664-68892 bp Feature: domain Description: GIIM Note: maturase Location: 68664-68892 bp Feature: domain Description: HNHc Note: nucleases Location: 69120-69276 bp Feature: domain Description: HNHc Note: nucleases Location: 691 20-69276 bp Feature: gene Location: 69529-70737 bp Feature: domain Description: PRK05579 Location: 69535-70729 bp Feature: domain Description: PRK05579 Location: 69535-70729 bp Feature: gene Location: 70745-71200 bp Feature: domain Description: dut Location: 70751-71195 bp Feature: domain Description: dut Location: 70751 -71 1 95 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00024 (DNA repair protein RadC), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK05579 (bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated), dut (TIGR00576)

Seq: NSWL01000001.1 (798920 bp)
Overview 1 RT 1: 526053-533302 bp Neighborhood of RT #1 [526053, 533364] HxlR PRK06333 RVT-UG2 YHI9 STN TonB-siderophor Feature: gene Location: 526053-526559 bp Feature: domain Description: HxlR Location: 526077-526395 bp Feature: domain Description: HxlR Location: 52 6077-52 6395 bp Feature: gene Location: 526668-527936 bp Feature: domain Description: PRK06333 Location: 526674-527931 bp Feature: domain Description: PRK06333 Location: 52 6674-52 7931 bp Feature: gene Location: 528435-529781 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 528684-529470 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 52 8684-52 9470 bp Feature: gene Location: 529965-530801 bp Feature: domain Description: YHI9 Location: 529977-530793 bp Feature: domain Description: YHI9 Location: 52 9977-530793 bp Feature: gene Location: 530962-533364 bp Feature: domain Description: STN Location: 531082-531235 bp Feature: domain Description: STN Location: 531082 -5312 35 bp Feature: domain Description: TonB-siderophor Location: 531343-533302 bp Feature: domain Description: TonB-siderophor Location: 531343-533302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HxlR (pfam01638), PRK06333 (beta-ketoacyl-ACP synthase), RVT-UG2, YHI9 (COG0384), STN (smart00965), TonB-siderophor (TIGR01783)

Seq: NSWL01000012.1 (159972 bp)
Overview 1 RT 1: 154144-159673 bp Neighborhood of RT #1 [154144, 159969] CHD CHD RVT-GII GIIM DUF772 Feature: gene Location: 154144-155688 bp Feature: domain Description: CHD Location: 154360-154774 bp Feature: domain Description: CHD Location: 1543 60-154774 bp Feature: domain Description: CHD Location: 155002-155491 bp Feature: domain Description: CHD Location: 155002-155491 bp Feature: gene Location: 156772-156951 bp Feature: gene Location: 157683-158951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157896-158553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 157896-158553 bp Feature: domain Description: GIIM Note: maturase Location: 158631-158853 bp Feature: domain Description: GIIM Note: maturase Location: 15863 1-158853 bp Feature: gene Location: 159340-159969 bp Feature: domain Description: DUF772 Location: 159478-159673 bp Feature: domain Description: DUF772 Location: 159478-159673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598)