myRT

myRT report for GCA_003841405.1_ASM384140v1

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Seq: PXYA01000001.1 (1167867 bp)
Overview 1 RT 1: 4876-8994 bp 2 RT 2: 99543-105387 bp 3 RT 3: 695507-699840 bp 4 RT 4: 853496-859020 bp 5 RT 5: 1073842-1079750 bp 6 RT 6: 1110420-1117628 bp Neighborhood of RT #1 [4876, 9089] PBP2_OppA PBP2_OppA RVT-GII GIIM PRK09034 PRK09034 Neighborhood of RT #2 [99543, 105410] FepC TroA_a RVT-GII GIIM SnoaL_2 PRK09441 Neighborhood of RT #3 [695507, 699848] GIIM RVT-GII Glyphos_transf Glyphos_transf Neighborhood of RT #4 [853496, 859187] AtpB RVT-GII GIIM smpB RNase_R Neighborhood of RT #5 [1073842, 1079758] PgpA MFS_LmrB_MDR_like RVT-GII GIIM FepD FepD Neighborhood of RT #6 [1110420, 1117642] PfoR GIIM RVT-GII group_II_RT_mat RVT-GII sialate_O-acetylesterase_like1 DeoR Feature: gene Location: 4876-5553 bp Feature: domain Description: PBP2_OppA Location: 4882-5458 bp Feature: domain Description: PBP2_OppA Location: 4882-5458 bp Feature: gene Location: 5607-5762 bp Feature: domain Description: PBP2_OppA Location: 5613-5748 bp Feature: domain Description: PBP2_OppA Location: 561 3-5748 bp Feature: gene Location: 5848-7146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6049-6667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6049-6667 bp Feature: domain Description: GIIM Note: maturase Location: 6724-6931 bp Feature: domain Description: GIIM Note: maturase Location: 6724-6931 bp Feature: gene Location: 7739-8449 bp Feature: domain Description: PRK09034 Location: 7742-8447 bp Feature: domain Description: PRK09034 Location: 7742-8447 bp Feature: gene Location: 8442-9089 bp Feature: domain Description: PRK09034 Location: 8445-8994 bp Feature: domain Description: PRK09034 Location: 8445-8994 bp Feature: gene Location: 99543-100307 bp Feature: domain Description: FepC Location: 99549-100281 bp Feature: domain Description: FepC Location: 99549-1 00281 bp Feature: gene Location: 100326-101360 bp Feature: domain Description: TroA_a Location: 100494-101337 bp Feature: domain Description: TroA_a Location: 1 00494-1 01 337 bp Feature: gene Location: 101998-103296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102199-102817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 021 99-1 0281 7 bp Feature: domain Description: GIIM Note: maturase Location: 102874-103081 bp Feature: domain Description: GIIM Note: maturase Location: 1 02874-1 03081 bp Feature: gene Location: 103465-103845 bp Feature: domain Description: SnoaL_2 Location: 103492-103801 bp Feature: domain Description: SnoaL_2 Location: 1 03492-1 03801 bp Feature: gene Location: 103911-105410 bp Feature: domain Description: PRK09441 Location: 103950-105387 bp Feature: domain Description: PRK09441 Location: 1 03950-1 05387 bp Feature: gene Location: 695507-695734 bp Feature: gene Location: 696067-696423 bp Feature: domain Description: GIIM Note: maturase Location: 696073-696268 bp Feature: domain Description: GIIM Note: maturase Location: 696073-696268 bp Feature: gene Location: 696477-697337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 696696-697311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 696696-69731 1 bp Feature: gene Location: 697207-697533 bp Feature: gene Location: 697899-699848 bp Feature: domain Description: Glyphos_transf Location: 698445-698715 bp Feature: domain Description: Glyphos_transf Location: 698445-69871 5 bp Feature: domain Description: Glyphos_transf Location: 698721-699840 bp Feature: domain Description: Glyphos_transf Location: 698721 -699840 bp Feature: gene Location: 853496-854212 bp Feature: domain Description: AtpB Location: 853541-854207 bp Feature: domain Description: AtpB Location: 853541 -854207 bp Feature: gene Location: 854274-854402 bp Feature: gene Location: 854562-855860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 854763-855381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 854763-855381 bp Feature: domain Description: GIIM Note: maturase Location: 855438-855645 bp Feature: domain Description: GIIM Note: maturase Location: 855438-855645 bp Feature: gene Location: 856387-856845 bp Feature: domain Description: smpB Location: 856408-856837 bp Feature: domain Description: smpB Location: 856408-856837 bp Feature: gene Location: 856869-859187 bp Feature: domain Description: RNase_R Location: 856884-859020 bp Feature: domain Description: RNase_R Location: 856884-859020 bp Feature: gene Location: 1073842-1074351 bp Feature: domain Description: PgpA Location: 1073869-1074316 bp Feature: domain Description: PgpA Location: 1 073869-1 07431 6 bp Feature: gene Location: 1074503-1075882 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 1074554-1075841 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 1 074554-1 075841 bp Feature: gene Location: 1075949-1077247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1076150-1076768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0761 50-1 076768 bp Feature: domain Description: GIIM Note: maturase Location: 1076825-1077032 bp Feature: domain Description: GIIM Note: maturase Location: 1 076825-1 077032 bp Feature: gene Location: 1077786-1078781 bp Feature: domain Description: FepD Location: 1077804-1078764 bp Feature: domain Description: FepD Location: 1 077804-1 078764 bp Feature: gene Location: 1078778-1079758 bp Feature: domain Description: FepD Location: 1078796-1079750 bp Feature: domain Description: FepD Location: 1 078796-1 079750 bp Feature: gene Location: 1110420-1111457 bp Feature: domain Description: PfoR Location: 1110432-1111434 bp Feature: domain Description: PfoR Location: 1 1 1 0432-1 1 1 1 434 bp Feature: gene Location: 1111756-1112112 bp Feature: domain Description: GIIM Note: maturase Location: 1111762-1111957 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 1 762-1 1 1 1 957 bp Feature: gene Location: 1112166-1113026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1112385-1113000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 2385-1 1 1 3000 bp Feature: gene Location: 1112896-1113222 bp Feature: gene Location: 1113658-1114161 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1113664-1114003 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 1 1 3664-1 1 1 4003 bp Feature: gene Location: 1114167-1114982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1114464-1114845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 4464-1 1 1 4845 bp Feature: gene Location: 1115817-1116545 bp Feature: domain Description: sialate_O-acetylesterase_like1 Location: 1115964-1116534 bp Feature: domain Description: sialate_O-acetylesterase_like1 Location: 1 1 1 5964-1 1 1 6534 bp Feature: gene Location: 1116677-1117642 bp Feature: domain Description: DeoR Location: 1116692-1117628 bp Feature: domain Description: DeoR Location: 1 1 1 6692-1 1 1 7628 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: PXYA01000003.1 (586232 bp)
Overview 1 RT 1: 394277-399411 bp 2 RT 2: 554189-557277 bp 3 RT 3: 572647-577289 bp Neighborhood of RT #1 [394277, 399411] P-type_ATPase_cation HipB RVT-GII GIIM Neighborhood of RT #2 [554189, 557277] PenP Beta-lactamase2 GIIM RVT-GII Neighborhood of RT #3 [572647, 577318] Putative_PNPOx PBECR4 RVT-GII GIIM Rve Feature: gene Location: 394277-396484 bp Feature: domain Description: P-type_ATPase_cation Location: 394346-396482 bp Feature: domain Description: P-type_ATPase_cation Location: 394346-396482 bp Feature: gene Location: 396481-396831 bp Feature: domain Description: HipB Location: 396502-396715 bp Feature: domain Description: HipB Location: 396502 -396715 bp Feature: gene Location: 397028-398350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 397277-397892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3972 77-397892 bp Feature: domain Description: GIIM Note: maturase Location: 397952-398159 bp Feature: domain Description: GIIM Note: maturase Location: 397952 -398159 bp Feature: gene Location: 398698-398841 bp Feature: gene Location: 398878-399411 bp Feature: gene Location: 554189-555070 bp Feature: domain Description: PenP Location: 554321-554582 bp Feature: domain Description: PenP Location: 55432 1-554582 bp Feature: domain Description: Beta-lactamase2 Location: 554585-554840 bp Feature: domain Description: Beta-lactamase2 Location: 554585-554840 bp Feature: gene Location: 555458-555814 bp Feature: domain Description: GIIM Note: maturase Location: 555464-555659 bp Feature: domain Description: GIIM Note: maturase Location: 555464-555659 bp Feature: gene Location: 555868-556728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 556087-556702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 556087-556702 bp Feature: gene Location: 556598-556924 bp Feature: gene Location: 557110-557277 bp Feature: gene Location: 572647-573024 bp Feature: domain Description: Putative_PNPOx Location: 572656-572941 bp Feature: domain Description: Putative_PNPOx Location: 572 656-572 941 bp Feature: gene Location: 573784-574284 bp Feature: domain Description: PBECR4 Location: 573790-574240 bp Feature: domain Description: PBECR4 Location: 573790-5742 40 bp Feature: gene Location: 574462-575760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 574663-575281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 574663-5752 81 bp Feature: domain Description: GIIM Note: maturase Location: 575338-575545 bp Feature: domain Description: GIIM Note: maturase Location: 575338-575545 bp Feature: gene Location: 576320-576496 bp Feature: gene Location: 576632-577318 bp Feature: domain Description: Rve Location: 576641-577289 bp Feature: domain Description: Rve Location: 576641-5772 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: PXYA01000004.1 (28565 bp)
Overview 1 RT 1: 18719-24320 bp Neighborhood of RT #1 [18719, 24358] YdaT PBP2_OppA RVT-GII GIIM PRK09034 PRK09034 Feature: gene Location: 18719-19171 bp Feature: domain Description: YdaT Location: 18722-19115 bp Feature: domain Description: YdaT Location: 18722-19115 bp Feature: gene Location: 19390-21033 bp Feature: domain Description: PBP2_OppA Location: 19498-21016 bp Feature: domain Description: PBP2_OppA Location: 19498-21016 bp Feature: gene Location: 21119-22417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21320-21938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 213 20-2193 8 bp Feature: domain Description: GIIM Note: maturase Location: 21995-22202 bp Feature: domain Description: GIIM Note: maturase Location: 21995-22202 bp Feature: gene Location: 23010-23732 bp Feature: domain Description: PRK09034 Location: 23016-23730 bp Feature: domain Description: PRK0903 4 Location: 23 016-23 73 0 bp Feature: gene Location: 23729-24358 bp Feature: domain Description: PRK09034 Location: 23732-24320 bp Feature: domain Description: PRK0903 4 Location: 23 73 2-243 20 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: PXYA01000002.1 (804210 bp)
Overview 1 RT 1: 112272-119850 bp 2 RT 2: 341343-345356 bp 3 RT 3: 427717-432224 bp 4 RT 4: 491970-504256 bp 5 RT 5: 615162-620211 bp 6 RT 6: 664037-669306 bp 7 RT 7: 762373-768823 bp Neighborhood of RT #1 [112272, 119873] Transposase_mut P-type_ATPase_HM RVT-GII GIIM RVT-GII GIIM CopZ Neighborhood of RT #2 [341343, 345367] FUSC_2 RVT-GII GIIM RplT rpmI Neighborhood of RT #3 [427717, 432463] COG3293 GIIM RVT-GII RAYT UPF0236 Neighborhood of RT #4 [491970, 504432] PRK06520 GIIM RVT-GII RVT-GII GIIM PRK00566 rpoB Neighborhood of RT #5 [615162, 620270] Peptidase_C1_2 GT8_A4GalT_like RVT-GII GIIM RsmG Neighborhood of RT #6 [664037, 669842] PRK12451 RVT-GII GIIM GlcU HTH_24 Mga Neighborhood of RT #7 [762373, 768834] LysM Transglycosylas PRK12554 RVT-GII GIIM Na_sulph_symp PRK08997 Feature: gene Location: 112272-113483 bp Feature: domain Description: Transposase_mut Location: 112281-113421 bp Feature: domain Description: Transposase_mut Location: 112281-1134 21 bp Feature: gene Location: 113838-115700 bp Feature: domain Description: P-type_ATPase_HM Location: 113880-115665 bp Feature: domain Description: P-type_ATPase_HM Location: 113880-115665 bp Feature: gene Location: 115915-117213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116140-116755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11614 0-116755 bp Feature: domain Description: GIIM Note: maturase Location: 116815-117022 bp Feature: domain Description: GIIM Note: maturase Location: 116815-117022 bp Feature: gene Location: 117785-119107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118034-118649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118034 -11864 9 bp Feature: domain Description: GIIM Note: maturase Location: 118709-118916 bp Feature: domain Description: GIIM Note: maturase Location: 118709-118916 bp Feature: gene Location: 119455-119604 bp Feature: gene Location: 119640-119873 bp Feature: domain Description: CopZ Location: 119643-119850 bp Feature: domain Description: CopZ Location: 11964 3-119850 bp Feature: gene Location: 341343-341510 bp Feature: gene Location: 341620-342675 bp Feature: domain Description: FUSC_2 Location: 342220-342589 bp Feature: domain Description: FUSC_2 Location: 34 2220-34 2589 bp Feature: gene Location: 343354-344652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343555-344173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 3555-34 4 173 bp Feature: domain Description: GIIM Note: maturase Location: 344230-344437 bp Feature: domain Description: GIIM Note: maturase Location: 34 4 230-34 4 4 37 bp Feature: gene Location: 344745-345107 bp Feature: domain Description: RplT Location: 344748-345096 bp Feature: domain Description: RplT Location: 34 4 74 8-34 5096 bp Feature: gene Location: 345167-345367 bp Feature: domain Description: rpmI Location: 345170-345356 bp Feature: domain Description: rpmI Location: 34 5170-34 5356 bp Feature: gene Location: 427717-428055 bp Feature: domain Description: COG3293 Location: 427723-428029 bp Feature: domain Description: COG3293 Location: 4 27723-4 28029 bp Feature: gene Location: 428364-428813 bp Feature: domain Description: GIIM Note: maturase Location: 428415-428622 bp Feature: domain Description: GIIM Note: maturase Location: 4 284 15-4 28622 bp Feature: gene Location: 428834-429685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429083-429674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 29083-4 29674 bp Feature: gene Location: 430271-430726 bp Feature: domain Description: RAYT Location: 430289-430670 bp Feature: domain Description: RAYT Location: 4 30289-4 30670 bp Feature: gene Location: 431045-432463 bp Feature: domain Description: UPF0236 Location: 431135-432224 bp Feature: domain Description: UPF0236 Location: 4 31135-4 32224 bp Feature: gene Location: 491970-493118 bp Feature: domain Description: PRK06520 Location: 491991-493110 bp Feature: domain Description: PRK06520 Location: 4 91991-4 93110 bp Feature: gene Location: 493330-493686 bp Feature: domain Description: GIIM Note: maturase Location: 493336-493531 bp Feature: domain Description: GIIM Note: maturase Location: 4 93336-4 93531 bp Feature: gene Location: 493740-494600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 493959-494574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 93959-4 94 574 bp Feature: gene Location: 494470-494796 bp Feature: gene Location: 495188-496510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 495437-496052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 954 37-4 96052 bp Feature: domain Description: GIIM Note: maturase Location: 496112-496319 bp Feature: domain Description: GIIM Note: maturase Location: 4 96112-4 96319 bp Feature: gene Location: 497032-500685 bp Feature: domain Description: PRK00566 Location: 497044-500629 bp Feature: domain Description: PRK00566 Location: 4 9704 4 -500629 bp Feature: gene Location: 500815-504432 bp Feature: domain Description: rpoB Location: 500836-504256 bp Feature: domain Description: rpoB Location: 500836-504 256 bp Feature: gene Location: 615162-616478 bp Feature: domain Description: Peptidase_C1_2 Location: 615177-616473 bp Feature: domain Description: Peptidase_C1_2 Location: 615177-6164 73 bp Feature: gene Location: 616652-617476 bp Feature: domain Description: GT8_A4GalT_like Location: 616661-617411 bp Feature: domain Description: GT8_A4 GalT_like Location: 616661-6174 11 bp Feature: gene Location: 618028-618888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 618247-618862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61824 7-618862 bp Feature: gene Location: 618942-619298 bp Feature: domain Description: GIIM Note: maturase Location: 618948-619143 bp Feature: domain Description: GIIM Note: maturase Location: 61894 8-61914 3 bp Feature: gene Location: 619554-620270 bp Feature: domain Description: RsmG Location: 619566-620211 bp Feature: domain Description: RsmG Location: 619566-620211 bp Feature: gene Location: 664037-665728 bp Feature: domain Description: PRK12451 Location: 664040-665726 bp Feature: domain Description: PRK124 51 Location: 664 04 0-665726 bp Feature: gene Location: 665780-665983 bp Feature: gene Location: 666349-667647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 666574-667189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 666574 -667189 bp Feature: domain Description: GIIM Note: maturase Location: 667249-667456 bp Feature: domain Description: GIIM Note: maturase Location: 66724 9-6674 56 bp Feature: gene Location: 667809-668675 bp Feature: domain Description: GlcU Location: 667815-668673 bp Feature: domain Description: GlcU Location: 667815-668673 bp Feature: gene Location: 668730-669842 bp Feature: domain Description: HTH_24 Location: 668862-668970 bp Feature: domain Description: HTH_24 Location: 668862-668970 bp Feature: domain Description: Mga Location: 669069-669306 bp Feature: domain Description: Mga Location: 669069-669306 bp Feature: gene Location: 762373-763050 bp Feature: domain Description: LysM Location: 762466-762604 bp Feature: domain Description: LysM Location: 7624 66-762604 bp Feature: domain Description: Transglycosylas Location: 762820-763048 bp Feature: domain Description: Transglycosylas Location: 762820-76304 8 bp Feature: gene Location: 763331-764152 bp Feature: domain Description: PRK12554 Location: 763358-764150 bp Feature: domain Description: PRK12554 Location: 763358-764 150 bp Feature: gene Location: 764279-765577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764480-765098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764 4 80-765098 bp Feature: domain Description: GIIM Note: maturase Location: 765155-765362 bp Feature: domain Description: GIIM Note: maturase Location: 765155-765362 bp Feature: gene Location: 766348-767772 bp Feature: domain Description: Na_sulph_symp Location: 766381-767755 bp Feature: domain Description: Na_sulph_symp Location: 766381-767755 bp Feature: gene Location: 767836-768834 bp Feature: domain Description: PRK08997 Location: 767842-768823 bp Feature: domain Description: PRK08997 Location: 76784 2-768823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT