myRT

myRT report for GCA_003851625.1_ASM385162v1

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Seq: BHXA01000197.1 (1076 bp)
Overview 1 RT 1: 1-1012 bp Neighborhood of RT #1 [1, 1068] RVT-GII GIIM HNH Feature: gene Location: 1-1068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-298 bp Feature: domain Description: GIIM Note: maturase Location: 355-586 bp Feature: domain Description: GIIM Note: maturase Location: 355-586 bp Feature: domain Description: HNH Note: nucleases Location: 910-1012 bp Feature: domain Description: HNH Note: nucleases Location: 91 0-1 01 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: BHXA01000225.1 (2135 bp)
Overview 1 RT 1: 3-1878 bp Neighborhood of RT #1 [3, 2012] RVT-GII GIIM Feature: gene Location: 3-437 bp Feature: gene Location: 549-2012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 891-1587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 891-1587 bp Feature: domain Description: GIIM Note: maturase Location: 1656-1878 bp Feature: domain Description: GIIM Note: maturase Location: 1656-1878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BHXA01000279.1 (1113 bp)
Overview 1 RT 1: 109-1113 bp Neighborhood of RT #1 [109, 1112] RVT-GII Feature: gene Location: 109-357 bp Feature: gene Location: 438-1112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: BHXA01000001.1 (19383 bp)
Overview 1 RT 1: 189-4368 bp Neighborhood of RT #1 [189, 4391] RVT-GII RVT-GII GIIM PRK08264 HTH_MerR-like_sg3 Feature: gene Location: 189-608 bp Feature: gene Location: 826-1074 bp Feature: gene Location: 1277-1849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1598-1820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1598-1820 bp Feature: gene Location: 2208-2504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2214-2283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2214 -2283 bp Feature: domain Description: GIIM Note: maturase Location: 2352-2487 bp Feature: domain Description: GIIM Note: maturase Location: 2352-24 87 bp Feature: gene Location: 3209-3937 bp Feature: domain Description: PRK08264 Location: 3212-3890 bp Feature: domain Description: PRK08264 Location: 3212-3890 bp Feature: gene Location: 4014-4391 bp Feature: domain Description: HTH_MerR-like_sg3 Location: 4050-4368 bp Feature: domain Description: HTH_MerR-like_sg3 Location: 4 050-4 368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK08264 (SDR family oxidoreductase), HTH_MerR-like_sg3 (cd01282)

Seq: BHXA01000269.1 (38077 bp)
Overview 1 RT 1: 30693-37886 bp Neighborhood of RT #1 [30693, 38074] BID_1 BID_1 RVT_N RVT-GII GIIM HNH COG3293 COG3293 DEDD_Tnp_IS110 Feature: gene Location: 30693-31274 bp Feature: gene Location: 31439-33121 bp Feature: domain Description: BID_1 Location: 31964-32159 bp Feature: domain Description: BID_1 Location: 31964-3215 9 bp Feature: domain Description: BID_1 Location: 32276-32465 bp Feature: domain Description: BID_1 Location: 32276-32465 bp Feature: gene Location: 34206-36005 bp Feature: domain Description: RVT_N Location: 34278-34515 bp Feature: domain Description: RVT_N Location: 34278-345 15 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34575-35235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 345 75 -35 235 bp Feature: domain Description: GIIM Note: maturase Location: 35292-35523 bp Feature: domain Description: GIIM Note: maturase Location: 35 292-35 5 23 bp Feature: domain Description: HNH Note: nucleases Location: 35847-35949 bp Feature: domain Description: HNH Note: nucleases Location: 35 847-35 949 bp Feature: gene Location: 36028-36723 bp Feature: domain Description: COG3293 Location: 36076-36262 bp Feature: domain Description: COG3293 Location: 36076-36262 bp Feature: domain Description: COG3293 Location: 36313-36694 bp Feature: domain Description: COG3293 Location: 36313-36694 bp Feature: gene Location: 37406-38074 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 37424-37886 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 37424-37886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BID_1 (smart00634), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3293 (Transposase ), DEDD_Tnp_IS110 (pfam01548)

Seq: BHXA01000286.1 (702 bp)
Overview 1 RT 1: 2-524 bp Neighborhood of RT #1 [2, 616] RVT-GII GIIM Feature: gene Location: 2-616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-227 bp Feature: domain Description: GIIM Note: maturase Location: 308-524 bp Feature: domain Description: GIIM Note: maturase Location: 308-524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BHXA01000193.1 (1950 bp)
Overview 1 RT 1: 16-1531 bp Neighborhood of RT #1 [16, 1947] RVT-GII Intron_maturas2 Feature: gene Location: 16-1947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 385-1180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 385-1180 bp Feature: domain Description: Intron_maturas2 Location: 1309-1531 bp Feature: domain Description: Intron_maturas2 Location: 1309-1531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: BHXA01000178.1 (1252 bp)
Overview 1 RT 1: 3-684 bp Neighborhood of RT #1 [3, 683] RVT_N RVT-GII Feature: gene Location: 3-683 bp Feature: domain Description: RVT_N Location: 75-312 bp Feature: domain Description: RVT_N Location: 75-312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372-684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372-68 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: BHXA01000112.1 (195805 bp)
Overview 1 RT 1: 37643-44490 bp Neighborhood of RT #1 [37643, 44507] AsnB Methyltransf_25 RVT-GII GIIM DDE_5 MarR Feature: gene Location: 37643-39115 bp Feature: domain Description: AsnB Location: 37886-38591 bp Feature: domain Description: AsnB Location: 37886-3859 1 bp Feature: gene Location: 39142-39858 bp Feature: domain Description: Methyltransf_25 Location: 39268-39532 bp Feature: domain Description: Methyltransf_25 Location: 39 268-39 532 bp Feature: gene Location: 40526-41776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40736-41390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40736-4139 0 bp Feature: domain Description: GIIM Note: maturase Location: 41471-41690 bp Feature: domain Description: GIIM Note: maturase Location: 41471-4169 0 bp Feature: gene Location: 42365-43834 bp Feature: domain Description: DDE_5 Location: 42437-43232 bp Feature: domain Description: DDE_5 Location: 42437-43232 bp Feature: gene Location: 44064-44507 bp Feature: domain Description: MarR Location: 44136-44490 bp Feature: domain Description: MarR Location: 44136-4449 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AsnB (COG0367), Methyltransf_25 (pfam13649), RVT-GII, GIIM (pfam08388), DDE_5 (pfam13546), MarR (pfam01047)

Seq: BHXA01000203.1 (5314 bp)
Overview 1 RT 1: 412-4658 bp Neighborhood of RT #1 [412, 4732] retinol-DH_like_SDR_c_like DDE_Tnp_1 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 412-1257 bp Feature: domain Description: retinol-DH_like_SDR_c_like Location: 418-1114 bp Feature: domain Description: retinol-DH_like_SDR_c_like Location: 418-1114 bp Feature: gene Location: 2217-2807 bp Feature: domain Description: DDE_Tnp_1 Location: 2283-2736 bp Feature: domain Description: DDE_Tnp_1 Location: 2283-2736 bp Feature: gene Location: 2906-4732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3167-3968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3167-3968 bp Feature: domain Description: Intron_maturas2 Location: 4085-4301 bp Feature: domain Description: Intron_maturas2 Location: 4085-4301 bp Feature: domain Description: HNHc Note: nucleases Location: 4496-4658 bp Feature: domain Description: HNHc Note: nucleases Location: 4496-4658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retinol-DH_like_SDR_c_like (cd05327), DDE_Tnp_1 (pfam01609), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)