myRT

myRT report for GCA_003853985.1_ASM385398v1

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Seq: QTRW01000080.1 (5992 bp)
Overview 1 RT 1: 2402-5845 bp Neighborhood of RT #1 [2402, 5859] DDE_Tnp_1_5 Gly_transf_sug RVT-GII Feature: gene Location: 2402-3514 bp Feature: domain Description: DDE_Tnp_1_5 Location: 2576-2897 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 2576-2897 bp Feature: gene Location: 3521-5188 bp Feature: domain Description: Gly_transf_sug Location: 4220-4553 bp Feature: domain Description: Gly_transf_sug Location: 4220-4553 bp Feature: gene Location: 5377-5859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5413-5845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 541 3-5845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_5 (pfam13737), Gly_transf_sug (pfam04488), RVT-GII

Seq: QTRW01000106.1 (1596 bp)
Overview 1 RT 1: 87-1218 bp Neighborhood of RT #1 [87, 1376] RVT-GII GIIM Feature: gene Location: 87-1376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342-957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342 -957 bp Feature: domain Description: GIIM Note: maturase Location: 1017-1218 bp Feature: domain Description: GIIM Note: maturase Location: 1017-12 18 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QTRW01000005.1 (287495 bp)
Overview 1 RT 1: 165771-169106 bp Neighborhood of RT #1 [165771, 169106] Avd_like RVT-DGRs Feature: gene Location: 165771-166235 bp Feature: gene Location: 166250-166606 bp Feature: domain Description: Avd_like Location: 166277-166583 bp Feature: domain Description: Avd_like Location: 166277-166583 bp Feature: gene Location: 166674-167945 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 167043-167730 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 167043 -16773 0 bp Feature: gene Location: 167956-168345 bp Feature: gene Location: 168348-169106 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: QTRW01000014.1 (187054 bp)
Overview 1 RT 1: 123849-129359 bp Neighborhood of RT #1 [123849, 129364] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 123849-125084 bp Feature: domain Description: MFS_MucK Location: 123927-125061 bp Feature: domain Description: MFS_MucK Location: 123927-125061 bp Feature: gene Location: 125383-125712 bp Feature: domain Description: Histone_HNS Location: 125404-125641 bp Feature: domain Description: Histone_HNS Location: 1254 04 -12564 1 bp Feature: gene Location: 126038-127387 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 126503-127139 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 126503-127139 bp Feature: gene Location: 127640-128128 bp Feature: domain Description: FIN Location: 127742-128093 bp Feature: domain Description: FIN Location: 12774 2-128093 bp Feature: gene Location: 128447-129364 bp Feature: domain Description: his_ut_repres Location: 128687-129359 bp Feature: domain Description: his_ut_repres Location: 128687-129359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: QTRW01000092.1 (3518 bp)
Overview 1 RT 1: 1-3455 bp Neighborhood of RT #1 [1, 3455] RVT-UG5 Feature: gene Location: 1-183 bp Feature: gene Location: 223-3261 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 739-1213 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 739-1213 bp Feature: gene Location: 3282-3455 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5

Seq: QTRW01000072.1 (11559 bp)
Overview 1 RT 1: 3472-9929 bp Neighborhood of RT #1 [3472, 9929] BKACE MFS_FsR RVT-GII Feature: gene Location: 3472-6897 bp Feature: domain Description: BKACE Location: 4057-5056 bp Feature: domain Description: BKACE Location: 4057-5056 bp Feature: gene Location: 7077-8321 bp Feature: domain Description: MFS_FsR Location: 7164-8265 bp Feature: domain Description: MFS_FsR Location: 716 4-826 5 bp Feature: gene Location: 8813-9160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9044-9158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9044-9158 bp Feature: gene Location: 9222-9479 bp Feature: gene Location: 9543-9929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BKACE (pfam05853), MFS_FsR (cd17478), RVT-GII

Seq: QTRW01000103.1 (1844 bp)
Overview 1 RT 1: 525-1680 bp Neighborhood of RT #1 [525, 1766] RVT-GII GIIM Feature: gene Location: 525-1766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 723-1380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 23-1380 bp Feature: domain Description: GIIM Note: maturase Location: 1458-1680 bp Feature: domain Description: GIIM Note: maturase Location: 1458-1680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)