myRT

myRT report for GCA_003854115.1_ASM385411v1

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Seq: QTSL01000048.1 (1859 bp)
Overview 1 RT 1: 88-1297 bp Neighborhood of RT #1 [88, 1455] RVT-GII GIIM Feature: gene Location: 88-1455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421-1036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421 -1 036 bp Feature: domain Description: GIIM Note: maturase Location: 1096-1297 bp Feature: domain Description: GIIM Note: maturase Location: 1 096-1 297 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QTSL01000005.1 (412079 bp)
Overview 1 RT 1: 277490-282873 bp Neighborhood of RT #1 [277490, 282878] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 277490-278737 bp Feature: domain Description: MFS_MucK Location: 277580-278714 bp Feature: domain Description: MFS_MucK Location: 2 77580-2 78714 bp Feature: gene Location: 279023-279352 bp Feature: domain Description: Histone_HNS Location: 279044-279281 bp Feature: domain Description: Histone_HNS Location: 2 79044-2 792 81 bp Feature: gene Location: 279672-281021 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 280137-280773 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 80137-2 80773 bp Feature: gene Location: 281274-281846 bp Feature: domain Description: FIN Location: 281454-281811 bp Feature: domain Description: FIN Location: 2 81454-2 81811 bp Feature: gene Location: 282069-282878 bp Feature: domain Description: his_ut_repres Location: 282201-282873 bp Feature: domain Description: his_ut_repres Location: 2 82 2 01-2 82 873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: QTSL01000002.1 (528174 bp)
Overview 1 RT 1: 350121-353045 bp Neighborhood of RT #1 [350121, 353365] MR_like_1 COG3450 RVT-G2L Feature: gene Location: 350121-351287 bp Feature: domain Description: MR_like_1 Location: 350127-351264 bp Feature: domain Description: MR_like_1 Location: 3 50127-3 51264 bp Feature: gene Location: 351631-351975 bp Feature: domain Description: COG3450 Location: 351634-351970 bp Feature: domain Description: COG3 450 Location: 3 5163 4-3 51970 bp Feature: gene Location: 352538-353365 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 352544-353045 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 3 52544-3 53 045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MR_like_1 (cd03326), COG3450 (Predicted enzyme of the cupin superfamily ), RVT-G2L