myRT

myRT report for GCA_003854675.1_ASM385467v1

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Seq: QTSF01000012.1 (205463 bp)
Overview 1 RT 1: 160696-166752 bp Neighborhood of RT #1 [160696, 166808] ilvH PRK05479 RVT-GII GIIM HNHc PRK05305 PssA Feature: gene Location: 160696-161187 bp Feature: domain Description: ilvH Location: 160699-161176 bp Feature: domain Description: ilvH Location: 1 60699-1 61 1 76 bp Feature: gene Location: 161293-162309 bp Feature: domain Description: PRK05479 Location: 161296-162277 bp Feature: domain Description: PRK05479 Location: 1 61 296-1 62277 bp Feature: gene Location: 163849-165159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163852-164440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 63852-1 64440 bp Feature: domain Description: GIIM Note: maturase Location: 164491-164725 bp Feature: domain Description: GIIM Note: maturase Location: 1 64491 -1 64725 bp Feature: domain Description: HNHc Note: nucleases Location: 164956-165109 bp Feature: domain Description: HNHc Note: nucleases Location: 1 64956-1 651 09 bp Feature: gene Location: 165276-165920 bp Feature: domain Description: PRK05305 Location: 165300-165912 bp Feature: domain Description: PRK05305 Location: 1 65300-1 6591 2 bp Feature: gene Location: 165936-166808 bp Feature: domain Description: PssA Location: 166074-166752 bp Feature: domain Description: PssA Location: 1 66074-1 66752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ilvH (PRK11895), PRK05479 (ketol-acid reductoisomerase; Provisional), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK05305 (phosphatidylserine decarboxylase family protein), PssA (COG1183)

Seq: QTSF01000008.1 (283848 bp)
Overview 1 RT 1: 122512-127895 bp Neighborhood of RT #1 [122512, 127900] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 122512-123747 bp Feature: domain Description: MFS_MucK Location: 122590-123724 bp Feature: domain Description: MFS_MucK Location: 12 2 590-12 372 4 bp Feature: gene Location: 124045-124374 bp Feature: domain Description: Histone_HNS Location: 124066-124303 bp Feature: domain Description: Histone_HNS Location: 12 4066-12 4303 bp Feature: gene Location: 124694-126043 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125159-125795 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 5159-12 5795 bp Feature: gene Location: 126296-126868 bp Feature: domain Description: FIN Location: 126476-126833 bp Feature: domain Description: FIN Location: 12 6476-12 6833 bp Feature: gene Location: 127091-127900 bp Feature: domain Description: his_ut_repres Location: 127223-127895 bp Feature: domain Description: his_ut_repres Location: 12 72 2 3-12 7895 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: QTSF01000006.1 (288340 bp)
Overview 1 RT 1: 162129-168602 bp Neighborhood of RT #1 [162129, 169012] RVT-UG7 DEXQc_UvrD DEXQc_UvrD UvrD_C_2 AAA_21 TOPRIM_OLD Feature: gene Location: 162129-162683 bp Feature: gene Location: 164385-165956 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 164760-165177 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 164760-165177 bp Feature: gene Location: 165982-167412 bp Feature: domain Description: DEXQc_UvrD Location: 166030-166258 bp Feature: domain Description: DEXQc_UvrD Location: 16603 0-166258 bp Feature: domain Description: DEXQc_UvrD Location: 166270-166498 bp Feature: domain Description: DEXQc_UvrD Location: 166270-166498 bp Feature: domain Description: UvrD_C_2 Location: 167269-167374 bp Feature: domain Description: UvrD_C_2 Location: 167269-1673 74 bp Feature: gene Location: 167405-169012 bp Feature: domain Description: AAA_21 Location: 167720-168257 bp Feature: domain Description: AAA_21 Location: 167720-168257 bp Feature: domain Description: TOPRIM_OLD Location: 168377-168602 bp Feature: domain Description: TOPRIM_OLD Location: 1683 77-168602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, DEXQc_UvrD (cd17932), UvrD_C_2 (pfam13538), AAA_21 (pfam13304), TOPRIM_OLD (cd01026)