myRT

myRT report for GCA_003855155.1_ASM385515v1

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Seq: CP034073.1 (5134949 bp)
Overview 1 RT 1: 457029-463112 bp 2 RT 2: 687359-692183 bp 3 RT 3: 717739-722134 bp 4 RT 4: 1048720-1055065 bp 5 RT 5: 1543402-1552533 bp 6 RT 6: 1600718-1605417 bp 7 RT 7: 3002504-3011245 bp 8 RT 8: 3800093-3803651 bp 9 RT 9: 4214038-4218794 bp 10 RT 10: 5051910-5057547 bp Neighborhood of RT #1 [457029, 463126] COG4849 PP2C_SIG RVT_N RVT-GII GIIM INT_RitA_C_like KOG3824 Neighborhood of RT #2 [687359, 692209] HTH_Tnp_ISL3 DDE_Tnp_ISL3 RVT_N RVT-GII GIIM InsE PHA02517 Neighborhood of RT #3 [717739, 722157] RVT_N RVT-GII GIIM SAVED ICE_VC0181 Neighborhood of RT #4 [1048720, 1055127] DUF2489 LPLAT_ABO13168-like RVT_N RVT-GII GIIM MhpC MS_channel Neighborhood of RT #5 [1543402, 1552562] DUF1499 MFS_ExuT_GudP_like RVT_N RVT-GII GIIM RVT_N RVT-GII GIIM Cytochrom_c3_2 flavo_cyto_c Neighborhood of RT #6 [1600718, 1605417] ComEB RVT-Retrons Neighborhood of RT #7 [3002504, 3011253] YydB RVT-GII GIIM PHA02517 InsE RVT_N RVT-GII recD Neighborhood of RT #8 [3800093, 3803656] TonB_C RVT-GII PRK08974 Neighborhood of RT #9 [4214038, 4218997] DUF1040 RVT_N RVT-GII GIIM RAYT RAYT RHS_repeat RHS_repeat RHS_repeat Neighborhood of RT #10 [5051910, 5057547] RND_mfp RND_mfp RVT_N RVT-GII GIIM SLR Feature: gene Location: 457029-457733 bp Feature: domain Description: COG4849 Location: 457164-457536 bp Feature: domain Description: COG4849 Location: 4571 64-457536 bp Feature: gene Location: 457730-458401 bp Feature: domain Description: PP2C_SIG Location: 457775-458300 bp Feature: domain Description: PP2C_SIG Location: 457775-458300 bp Feature: gene Location: 459098-460570 bp Feature: domain Description: RVT_N Location: 459146-459389 bp Feature: domain Description: RVT_N Location: 4591 46-459389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 459434-460061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 459434-460061 bp Feature: domain Description: GIIM Note: maturase Location: 460118-460346 bp Feature: domain Description: GIIM Note: maturase Location: 4601 1 8-460346 bp Feature: gene Location: 460897-461490 bp Feature: domain Description: INT_RitA_C_like Location: 460942-461473 bp Feature: domain Description: INT_RitA_C_like Location: 460942-461 473 bp Feature: gene Location: 461588-463126 bp Feature: domain Description: KOG3824 Location: 462812-463112 bp Feature: domain Description: KOG3824 Location: 46281 2-4631 1 2 bp Feature: gene Location: 687359-687583 bp Feature: gene Location: 687700-688938 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 687964-688111 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 687964-6881 1 1 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 688168-688879 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 6881 68-688879 bp Feature: gene Location: 689120-690592 bp Feature: domain Description: RVT_N Location: 689168-689411 bp Feature: domain Description: RVT_N Location: 6891 68-68941 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 689456-690083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 689456-690083 bp Feature: domain Description: GIIM Note: maturase Location: 690140-690368 bp Feature: domain Description: GIIM Note: maturase Location: 6901 40-690368 bp Feature: gene Location: 691050-691361 bp Feature: domain Description: InsE Location: 691074-691347 bp Feature: domain Description: InsE Location: 691 074-691 347 bp Feature: gene Location: 691361-692209 bp Feature: domain Description: PHA02517 Location: 691490-692183 bp Feature: domain Description: PHA0251 7 Location: 691 490-6921 83 bp Feature: gene Location: 717739-717888 bp Feature: gene Location: 718030-718179 bp Feature: gene Location: 718343-719815 bp Feature: domain Description: RVT_N Location: 718391-718634 bp Feature: domain Description: RVT_N Location: 71 8391 -71 8634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 718679-719306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 8679-71 9306 bp Feature: domain Description: GIIM Note: maturase Location: 719363-719591 bp Feature: domain Description: GIIM Note: maturase Location: 71 9363-71 9591 bp Feature: gene Location: 720594-721679 bp Feature: domain Description: SAVED Location: 721125-721647 bp Feature: domain Description: SAVED Location: 721 1 25-721 647 bp Feature: gene Location: 721672-722157 bp Feature: domain Description: ICE_VC0181 Location: 721735-722134 bp Feature: domain Description: ICE_VC01 81 Location: 721 735-7221 34 bp Feature: gene Location: 1048720-1049187 bp Feature: domain Description: DUF2489 Location: 1048759-1049155 bp Feature: domain Description: DUF2489 Location: 1 048759-1 0491 55 bp Feature: gene Location: 1049576-1050145 bp Feature: domain Description: LPLAT_ABO13168-like Location: 1049603-1050080 bp Feature: domain Description: LPLAT_ABO1 31 68-like Location: 1 049603-1 050080 bp Feature: gene Location: 1050833-1052305 bp Feature: domain Description: RVT_N Location: 1050881-1051124 bp Feature: domain Description: RVT_N Location: 1 050881 -1 051 1 24 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1051169-1051796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 051 1 69-1 051 796 bp Feature: domain Description: GIIM Note: maturase Location: 1051853-1052081 bp Feature: domain Description: GIIM Note: maturase Location: 1 051 853-1 052081 bp Feature: gene Location: 1052329-1053831 bp Feature: domain Description: MhpC Location: 1052542-1053331 bp Feature: domain Description: MhpC Location: 1 052542-1 053331 bp Feature: gene Location: 1053859-1055127 bp Feature: domain Description: MS_channel Location: 1054303-1055065 bp Feature: domain Description: MS_channel Location: 1 054303-1 055065 bp Feature: gene Location: 1543402-1544160 bp Feature: domain Description: DUF1499 Location: 1543747-1544149 bp Feature: domain Description: DUF1 499 Location: 1 543747-1 5441 49 bp Feature: gene Location: 1544644-1545888 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 1544680-1545826 bp Feature: domain Description: MFS_ExuT_GudP_like Location: 1 544680-1 545826 bp Feature: gene Location: 1546150-1547622 bp Feature: domain Description: RVT_N Location: 1546198-1546441 bp Feature: domain Description: RVT_N Location: 1 5461 98-1 546441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1546486-1547113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 546486-1 5471 1 3 bp Feature: domain Description: GIIM Note: maturase Location: 1547170-1547398 bp Feature: domain Description: GIIM Note: maturase Location: 1 5471 70-1 547398 bp Feature: gene Location: 1548312-1549826 bp Feature: domain Description: RVT_N Location: 1548402-1548645 bp Feature: domain Description: RVT_N Location: 1 548402-1 548645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1548690-1549317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 548690-1 54931 7 bp Feature: domain Description: GIIM Note: maturase Location: 1549377-1549602 bp Feature: domain Description: GIIM Note: maturase Location: 1 549377-1 549602 bp Feature: gene Location: 1549892-1550179 bp Feature: gene Location: 1550772-1552562 bp Feature: domain Description: Cytochrom_c3_2 Location: 1550868-1551108 bp Feature: domain Description: Cytochrom_c3_2 Location: 1 550868-1 551 1 08 bp Feature: domain Description: flavo_cyto_c Location: 1551231-1552533 bp Feature: domain Description: flavo_cyto_c Location: 1 551 231 -1 552533 bp Feature: gene Location: 1600718-1602178 bp Feature: domain Description: ComEB Location: 1601336-1601972 bp Feature: domain Description: ComEB Location: 1 601 336-1 601 972 bp Feature: gene Location: 1602355-1602495 bp Feature: gene Location: 1602816-1603787 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1602978-1603533 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 602978-1 603533 bp Feature: gene Location: 1603909-1604862 bp Feature: gene Location: 1605136-1605417 bp Feature: gene Location: 3002504-3003382 bp Feature: gene Location: 3003601-3005361 bp Feature: domain Description: YydB Location: 3003622-3005332 bp Feature: domain Description: YydB Location: 3003622-3005332 bp Feature: gene Location: 3005747-3006841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3005750-3006332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3005750-3006332 bp Feature: domain Description: GIIM Note: maturase Location: 3006392-3006617 bp Feature: domain Description: GIIM Note: maturase Location: 3006392-300661 7 bp Feature: gene Location: 3006871-3007719 bp Feature: domain Description: PHA02517 Location: 3007000-3007693 bp Feature: domain Description: PHA0251 7 Location: 3007000-3007693 bp Feature: gene Location: 3007719-3008030 bp Feature: domain Description: InsE Location: 3007743-3008016 bp Feature: domain Description: InsE Location: 3007743-300801 6 bp Feature: gene Location: 3008074-3008520 bp Feature: domain Description: RVT_N Location: 3008164-3008407 bp Feature: domain Description: RVT_N Location: 30081 64-3008407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3008452-3008503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3008452-3008503 bp Feature: gene Location: 3008586-3008873 bp Feature: gene Location: 3009361-3011253 bp Feature: domain Description: recD Location: 3009364-3011245 bp Feature: domain Description: recD Location: 3009364-301 1 245 bp Feature: gene Location: 3800093-3800239 bp Feature: gene Location: 3800736-3801080 bp Feature: domain Description: TonB_C Location: 3800841-3801072 bp Feature: domain Description: TonB_C Location: 3800841 -3801 072 bp Feature: gene Location: 3801379-3801615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3801424-3801574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3801 424-3801 574 bp Feature: gene Location: 3801729-3801899 bp Feature: gene Location: 3801983-3803656 bp Feature: domain Description: PRK08974 Location: 3802004-3803651 bp Feature: domain Description: PRK08974 Location: 3802004-3803651 bp Feature: gene Location: 4214038-4214358 bp Feature: domain Description: DUF1040 Location: 4214095-4214350 bp Feature: domain Description: DUF1 040 Location: 421 4095-421 4350 bp Feature: gene Location: 4214416-4214595 bp Feature: gene Location: 4215352-4216866 bp Feature: domain Description: RVT_N Location: 4215442-4215685 bp Feature: domain Description: RVT_N Location: 421 5442-421 5685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4215730-4216357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421 5730-421 6357 bp Feature: domain Description: GIIM Note: maturase Location: 4216417-4216642 bp Feature: domain Description: GIIM Note: maturase Location: 421 641 7-421 6642 bp Feature: gene Location: 4217244-4218221 bp Feature: domain Description: RAYT Location: 4217400-4217487 bp Feature: domain Description: RAYT Location: 421 7400-421 7487 bp Feature: domain Description: RAYT Location: 4217649-4217844 bp Feature: domain Description: RAYT Location: 421 7649-421 7844 bp Feature: gene Location: 4218302-4218997 bp Feature: domain Description: RHS_repeat Location: 4218518-4218548 bp Feature: domain Description: RHS_repeat Location: 421 851 8-421 8548 bp Feature: domain Description: RHS_repeat Location: 4218650-4218692 bp Feature: domain Description: RHS_repeat Location: 421 8650-421 8692 bp Feature: domain Description: RHS_repeat Location: 4218716-4218794 bp Feature: domain Description: RHS_repeat Location: 421 871 6-421 8794 bp Feature: gene Location: 5051910-5053238 bp Feature: domain Description: RND_mfp Location: 5052153-5052408 bp Feature: domain Description: RND_mfp Location: 50521 53-5052408 bp Feature: domain Description: RND_mfp Location: 5052666-5053233 bp Feature: domain Description: RND_mfp Location: 5052666-5053233 bp Feature: gene Location: 5053919-5054047 bp Feature: gene Location: 5054258-5055730 bp Feature: domain Description: RVT_N Location: 5054306-5054549 bp Feature: domain Description: RVT_N Location: 5054306-5054549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5054594-5055221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5054594-5055221 bp Feature: domain Description: GIIM Note: maturase Location: 5055278-5055506 bp Feature: domain Description: GIIM Note: maturase Location: 5055278-5055506 bp Feature: gene Location: 5056398-5056952 bp Feature: domain Description: SLR Location: 5056434-5056806 bp Feature: domain Description: SLR Location: 5056434-5056806 bp Feature: gene Location: 5057347-5057547 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4849 (Predicted nucleotidyltransferase ), PP2C_SIG (smart00331), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), INT_RitA_C_like (cd01188), KOG3824 (KOG3824, Huntingtin interacting protein HYPE ), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), InsE (COG2963)
PHA02517 (putative transposase OrfB; Reviewed), SAVED (pfam18145), ICE_VC0181 (TIGR02256), DUF2489 (pfam10675), LPLAT_ABO13168-like (cd07988), MhpC (COG0596), MS_channel (pfam00924), DUF1499 (pfam07386), MFS_ExuT_GudP_like (cd17319), Cytochrom_c3_2 (pfam14537)
flavo_cyto_c (TIGR01813), ComEB (TIGR02571), RVT-Retrons, YydB (COG5293), recD (TIGR01447), TonB_C (pfam03544), PRK08974 (long-chain-fatty-acid--CoA ligase FadD), DUF1040 (pfam06288), RAYT (COG1943), RHS_repeat (pfam05593)
RND_mfp (TIGR01730), SLR (sd00010)