myRT

myRT report for GCA_003857965.1_ASM385796v1

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Seq: QTPW01000013.1 (174288 bp)
Overview 1 RT 1: 125421-131463 bp Neighborhood of RT #1 [125421, 131519] ilvH PRK05479 RVT_N RVT-GII GIIM HNHc PRK05305 PssA Feature: gene Location: 125421-125912 bp Feature: domain Description: ilvH Location: 125424-125901 bp Feature: domain Description: ilvH Location: 1 25424-1 25901 bp Feature: gene Location: 126008-127024 bp Feature: domain Description: PRK05479 Location: 126011-126992 bp Feature: domain Description: PRK05479 Location: 1 2601 1 -1 26992 bp Feature: gene Location: 128308-129873 bp Feature: domain Description: RVT_N Location: 128311-128461 bp Feature: domain Description: RVT_N Location: 1 2831 1 -1 28461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 128506-129154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 28506-1 291 54 bp Feature: domain Description: GIIM Note: maturase Location: 129205-129439 bp Feature: domain Description: GIIM Note: maturase Location: 1 29205-1 29439 bp Feature: domain Description: HNHc Note: nucleases Location: 129670-129823 bp Feature: domain Description: HNHc Note: nucleases Location: 1 29670-1 29823 bp Feature: gene Location: 129990-130634 bp Feature: domain Description: PRK05305 Location: 130014-130626 bp Feature: domain Description: PRK05305 Location: 1 3001 4-1 30626 bp Feature: gene Location: 130650-131519 bp Feature: domain Description: PssA Location: 130785-131463 bp Feature: domain Description: PssA Location: 1 30785-1 31 463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QTPW01000031.1 (90572 bp)
Overview 1 RT 1: 18461-23902 bp Neighborhood of RT #1 [18461, 23925] dTDP_HR_like_SDR_e FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 18461-19414 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 18488-19373 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 18488-19373 bp Feature: gene Location: 19622-20143 bp Feature: domain Description: FIN Location: 19751-20108 bp Feature: domain Description: FIN Location: 19751-2 0108 bp Feature: gene Location: 20266-21726 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20842-21478 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 0842 -2 1478 bp Feature: gene Location: 22093-22422 bp Feature: domain Description: Histone_HNS Location: 22117-22351 bp Feature: domain Description: Histone_HNS Location: 2 2 117-2 2 351 bp Feature: gene Location: 22690-23925 bp Feature: domain Description: MFS_MucK Location: 22768-23902 bp Feature: domain Description: MFS_MucK Location: 2 2 768-2 3902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QTPW01000007.1 (291074 bp)
Overview 1 RT 1: 232459-236405 bp Neighborhood of RT #1 [232459, 236405] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 232459-232941 bp Feature: domain Description: DUF1566 Location: 232741-232918 bp Feature: domain Description: DUF1566 Location: 23 2741-23 2918 bp Feature: gene Location: 232956-233333 bp Feature: domain Description: Avd_like Location: 232983-233289 bp Feature: domain Description: Avd_like Location: 23 2983 -23 3 289 bp Feature: gene Location: 233326-234654 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 233752-234439 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 23 3 752-23 443 9 bp Feature: gene Location: 234664-235902 bp Feature: gene Location: 235899-236405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QTPW01000032.1 (89028 bp)
Overview 1 RT 1: 43771-50290 bp Neighborhood of RT #1 [43771, 50316] PBP1_XylR AraC galactose_mutarotase_like RVT-GII gram_neg_porins PBP2_HisJ_LAO Feature: gene Location: 43771-45003 bp Feature: domain Description: PBP1_XylR Location: 43846-44659 bp Feature: domain Description: PBP1_XylR Location: 4 384 6-4 4 659 bp Feature: domain Description: AraC Location: 44677-44986 bp Feature: domain Description: AraC Location: 4 4 677-4 4 986 bp Feature: gene Location: 45031-46119 bp Feature: domain Description: galactose_mutarotase_like Location: 45130-46102 bp Feature: domain Description: galactose_mutarotase_like Location: 4 5130-4 6102 bp Feature: gene Location: 46448-47926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46859-47546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 6859-4 754 6 bp Feature: gene Location: 48283-49467 bp Feature: domain Description: gram_neg_porins Location: 48352-49465 bp Feature: domain Description: gram_neg_porins Location: 4 8352-4 94 65 bp Feature: gene Location: 49522-50316 bp Feature: domain Description: PBP2_HisJ_LAO Location: 49609-50290 bp Feature: domain Description: PBP2_HisJ_LAO Location: 4 9609-50290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT