myRT

myRT report for GCA_003858555.1_ASM385855v1

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Seq: CM012200.1 (128536 bp)
Overview 1 RT 1: 26214-30879 bp Neighborhood of RT #1 [26214, 30879] PRK15417 Arr-ms RVT-GII GIIM N6_acetyl_AAC6 Feature: gene Location: 26214-27227 bp Feature: domain Description: PRK15417 Location: 26217-27225 bp Feature: domain Description: PRK1 541 7 Location: 2621 7-27225 bp Feature: gene Location: 27226-27852 bp Feature: domain Description: Arr-ms Location: 27460-27766 bp Feature: domain Description: Arr-ms Location: 27460-27766 bp Feature: gene Location: 27933-29288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28227-28851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28227-28851 bp Feature: domain Description: GIIM Note: maturase Location: 28890-29109 bp Feature: domain Description: GIIM Note: maturase Location: 28890-291 09 bp Feature: gene Location: 29907-30461 bp Feature: domain Description: N6_acetyl_AAC6 Location: 29910-30459 bp Feature: domain Description: N6_acetyl_AAC6 Location: 2991 0-30459 bp Feature: gene Location: 30451-30879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15417 (integron integrase), Arr-ms (pfam12120), RVT-GII, GIIM (pfam08388), N6_acetyl_AAC6 (TIGR04431)

Seq: QRGN01000001.1 (5339953 bp)
Overview 1 RT 1: 786753-792478 bp Neighborhood of RT #1 [786753, 792696] FimC FimD RVT-UG4 Integrase_1 Feature: gene Location: 786753-787481 bp Feature: domain Description: FimC Location: 786801-787464 bp Feature: domain Description: FimC Location: 786801-787464 bp Feature: gene Location: 787513-790122 bp Feature: domain Description: FimD Location: 787570-790111 bp Feature: domain Description: FimD Location: 787570-790111 bp Feature: gene Location: 790122-791363 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 790530-790974 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 790530-790974 bp Feature: gene Location: 791360-792199 bp Feature: gene Location: 792256-792696 bp Feature: domain Description: Integrase_1 Location: 792262-792478 bp Feature: domain Description: Integrase_1 Location: 792 2 62 -792 478 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835)