myRT

myRT report for GCA_003860955.1_ASM386095v1

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Seq: RDAD01000004.1 (71641 bp)
Overview 1 RT 1: 37377-40525 bp Neighborhood of RT #1 [37377, 40542] DDE_Tnp_IS1 InsA RVT-GII PRK10276 Feature: gene Location: 37377-37754 bp Feature: domain Description: DDE_Tnp_IS1 Location: 37380-37752 bp Feature: domain Description: DDE_Tnp_IS1 Location: 37380-37752 bp Feature: gene Location: 37799-38074 bp Feature: domain Description: InsA Location: 37802-38066 bp Feature: domain Description: InsA Location: 37802-38066 bp Feature: gene Location: 38226-39560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38481-39168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38481 -391 68 bp Feature: gene Location: 39554-39790 bp Feature: gene Location: 39859-40542 bp Feature: domain Description: PRK10276 Location: 40162-40525 bp Feature: domain Description: PRK1 0276 Location: 401 62-40525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: RDAD01000002.1 (373956 bp)
Overview 1 RT 1: 301478-305509 bp Neighborhood of RT #1 [301478, 305509] DDE_Tnp_IS1 RVT-GII INT_Cre_C Feature: gene Location: 301478-301981 bp Feature: domain Description: DDE_Tnp_IS1 Location: 301589-301979 bp Feature: domain Description: DDE_Tnp_IS1 Location: 301589-301979 bp Feature: gene Location: 302133-302366 bp Feature: gene Location: 302417-303904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302822-303512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302 82 2 -303512 bp Feature: gene Location: 303990-305126 bp Feature: domain Description: INT_Cre_C Location: 304413-305067 bp Feature: domain Description: INT_Cre_C Location: 304413-305067 bp Feature: gene Location: 305192-305509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), RVT-GII, INT_Cre_C (cd00799)

Seq: RDAD01000005.1 (228784 bp)
Overview 1 RT 1: 26514-30877 bp 2 RT 2: 49174-52355 bp 3 RT 3: 194609-198360 bp 4 RT 4: 216781-219381 bp Neighborhood of RT #1 [26514, 30891] DDE_Tnp_IS1 BetT RVT-GII RVT-GII PRK10276 Neighborhood of RT #2 [49174, 52355] PRK09928 RVT-GII Neighborhood of RT #3 [194609, 198360] BetT BetT RVT-GII Neighborhood of RT #4 [216781, 219381] PRK10276 RVT-GII group_II_RT_mat Feature: gene Location: 26514-26909 bp Feature: domain Description: DDE_Tnp_IS1 Location: 26520-26907 bp Feature: domain Description: DDE_Tnp_IS1 Location: 26520-26907 bp Feature: gene Location: 27055-28263 bp Feature: domain Description: BetT Location: 27091-28213 bp Feature: domain Description: BetT Location: 27091-28213 bp Feature: gene Location: 28547-29188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28550-28760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28550-28760 bp Feature: gene Location: 29188-29763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29287-29656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29287-29656 bp Feature: gene Location: 29802-30272 bp Feature: gene Location: 30466-30891 bp Feature: domain Description: PRK10276 Location: 30469-30877 bp Feature: domain Description: PRK10276 Location: 3 0469-3 0877 bp Feature: gene Location: 49174-49671 bp Feature: domain Description: PRK09928 Location: 49195-49669 bp Feature: domain Description: PRK09928 Location: 49195-49669 bp Feature: gene Location: 49858-50070 bp Feature: gene Location: 50145-51554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50472-51162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50472-51162 bp Feature: gene Location: 51470-52018 bp Feature: gene Location: 52077-52355 bp Feature: gene Location: 194609-194947 bp Feature: domain Description: BetT Location: 194645-194942 bp Feature: domain Description: BetT Location: 194645-194942 bp Feature: gene Location: 194947-195963 bp Feature: domain Description: BetT Location: 194950-195958 bp Feature: domain Description: BetT Location: 194950-195958 bp Feature: gene Location: 196141-197478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 196396-197086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1963 96-197086 bp Feature: gene Location: 197472-197792 bp Feature: gene Location: 197962-198360 bp Feature: gene Location: 216781-217068 bp Feature: domain Description: PRK10276 Location: 216784-217033 bp Feature: domain Description: PRK10276 Location: 216784-21703 3 bp Feature: gene Location: 217189-217359 bp Feature: gene Location: 217367-218155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 217865-218153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 217865-218153 bp Feature: gene Location: 218571-218801 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 218580-218778 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 218580-218778 bp Feature: gene Location: 218836-219381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), BetT (COG1292), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PRK09928 (choline transport protein BetT; Provisional), group_II_RT_mat (TIGR04416)

Seq: RDAD01000006.1 (46264 bp)
Overview 1 RT 1: 4793-7100 bp 2 RT 2: 25808-28402 bp Neighborhood of RT #1 [4793, 7100] BCCT RVT-GII Neighborhood of RT #2 [25808, 28402] PRK10276 RVT-GII RVT-GII group_II_RT_mat Feature: gene Location: 4793-5083 bp Feature: domain Description: BCCT Location: 4850-5006 bp Feature: domain Description: BCCT Location: 4 850-5006 bp Feature: gene Location: 5370-5528 bp Feature: gene Location: 5780-6310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5786-6278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5786-6278 bp Feature: gene Location: 6515-6760 bp Feature: gene Location: 6969-7100 bp Feature: gene Location: 25808-26032 bp Feature: domain Description: PRK10276 Location: 25814-25997 bp Feature: domain Description: PRK10276 Location: 25814 -25997 bp Feature: gene Location: 26359-26742 bp Feature: gene Location: 26777-27166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26879-27164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26879-27164 bp Feature: gene Location: 27121-27597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27157-27559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27157-27559 bp Feature: gene Location: 27621-27944 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 27627-27816 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 27627-27816 bp Feature: gene Location: 28172-28402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BCCT (pfam02028), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), group_II_RT_mat (TIGR04416)

Seq: RDAD01000001.1 (5397042 bp)
Overview 1 RT 1: 1419686-1423087 bp 2 RT 2: 1861586-1867346 bp 3 RT 3: 2204944-2206974 bp 4 RT 4: 3557691-3564169 bp 5 RT 5: 4008891-4012128 bp Neighborhood of RT #1 [1419686, 1423188] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1861586, 1867375] int RVT-GII Phage_CP76 Neighborhood of RT #3 [2204944, 2206974] RVT-GII Neighborhood of RT #4 [3557691, 3564171] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #5 [4008891, 4012128] Terminase_2 RVT-GII Feature: gene Location: 1419686-1420417 bp Feature: domain Description: Laminin_G_3 Location: 1420007-1420361 bp Feature: domain Description: Laminin_G_3 Location: 1420007-1420361 bp Feature: gene Location: 1420864-1421337 bp Feature: gene Location: 1421376-1422554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1421475-1422162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1421475 -1422162 bp Feature: gene Location: 1422644-1422823 bp Feature: gene Location: 1422871-1423188 bp Feature: domain Description: PRK10276 Location: 1422877-1422991 bp Feature: domain Description: PRK10276 Location: 1422877-1422991 bp Feature: domain Description: PRK10276 Location: 1423018-1423087 bp Feature: domain Description: PRK10276 Location: 1423018-1423087 bp Feature: gene Location: 1861586-1862638 bp Feature: domain Description: int Location: 1861589-1862588 bp Feature: domain Description: int Location: 18615 89-18625 88 bp Feature: gene Location: 1862925-1863317 bp Feature: gene Location: 1863356-1864666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1863455-1864145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186345 5 -1864145 bp Feature: gene Location: 1866612-1866833 bp Feature: gene Location: 1866866-1867375 bp Feature: domain Description: Phage_CP76 Location: 1866878-1867346 bp Feature: domain Description: Phage_CP76 Location: 1866878-1867346 bp Feature: gene Location: 2204944-2205090 bp Feature: gene Location: 2205335-2205547 bp Feature: gene Location: 2205693-2206424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2205948-2206317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2205 948-2206317 bp Feature: gene Location: 2206531-2206749 bp Feature: gene Location: 2206753-2206974 bp Feature: gene Location: 3557691-3558749 bp Feature: domain Description: YccC Location: 3557697-3558735 bp Feature: domain Description: YccC Location: 35 5 7697-35 5 8735 bp Feature: gene Location: 3558848-3559321 bp Feature: domain Description: PRK10016 Location: 3558851-3559310 bp Feature: domain Description: PRK10016 Location: 35 5 885 1-35 5 9310 bp Feature: gene Location: 3559230-3561095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3559842-3560532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 5 9842-35 605 32 bp Feature: gene Location: 3561403-3562572 bp Feature: domain Description: dacD Location: 3561412-3562567 bp Feature: domain Description: dacD Location: 35 61412-35 625 67 bp Feature: gene Location: 3562747-3564171 bp Feature: domain Description: SbcB Location: 3562753-3564169 bp Feature: domain Description: SbcB Location: 35 6275 3-35 64169 bp Feature: gene Location: 4008891-4009475 bp Feature: domain Description: Terminase_2 Location: 4008936-4009401 bp Feature: domain Description: Terminase_2 Location: 4008936-4009401 bp Feature: gene Location: 4009553-4009810 bp Feature: gene Location: 4010205-4011572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4010610-4011222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4010610-4011222 bp Feature: gene Location: 4011609-4011755 bp Feature: gene Location: 4011790-4012128 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), int (PHA02601), Phage_CP76 (pfam06892), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925), Terminase_2 (pfam03592)