myRT

myRT report for GCA_003860995.1_ASM386099v1

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Seq: RCZW01000006.1 (256860 bp)
Overview 1 RT 1: 230071-232799 bp Neighborhood of RT #1 [230071, 232799] PRK10276 RVT-GII Y2_Tnp Feature: gene Location: 230071-230496 bp Feature: domain Description: PRK10276 Location: 230074-230482 bp Feature: domain Description: PRK1 0276 Location: 230074-230482 bp Feature: gene Location: 230690-230902 bp Feature: gene Location: 230977-231489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231304-231460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231 304-231 460 bp Feature: gene Location: 231604-232467 bp Feature: domain Description: Y2_Tnp Location: 231700-232234 bp Feature: domain Description: Y2_Tnp Location: 231 700-232234 bp Feature: gene Location: 232614-232799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Y2_Tnp (pfam04986)

Seq: RCZW01000001.1 (5503149 bp)
Overview 1 RT 1: 87224-92358 bp 2 RT 2: 266333-270186 bp 3 RT 3: 610530-614014 bp 4 RT 4: 1051833-1056380 bp 5 RT 5: 3668843-3674576 bp 6 RT 6: 3833614-3836426 bp 7 RT 7: 4281561-4286872 bp Neighborhood of RT #1 [87224, 92366] umuC PRK10276 RVT-GII PinE Neighborhood of RT #2 [266333, 270186] umuC PRK10276 RVT-GII Neighborhood of RT #3 [610530, 614034] RVT-GII int YbjK Neighborhood of RT #4 [1051833, 1056380] PRK10276 PRK10276 RVT-GII RVT-GII Laminin_G_3 Neighborhood of RT #5 [3668843, 3674581] dam Phage_GPA RVT-GII DinI Neighborhood of RT #6 [3833614, 3836426] RVT-GII RVT-GII Neighborhood of RT #7 [4281561, 4286883] SbcB dacD RVT-GII group_II_RT_mat PRK10016 Feature: gene Location: 87224-88489 bp Feature: domain Description: umuC Location: 87227-88487 bp Feature: domain Description: umuC Location: 872 2 7-88487 bp Feature: gene Location: 88491-88997 bp Feature: domain Description: PRK10276 Location: 88581-88992 bp Feature: domain Description: PRK102 76 Location: 88581-88992 bp Feature: gene Location: 89111-90319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89363-90050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89363-90050 bp Feature: gene Location: 90459-90671 bp Feature: gene Location: 91857-92366 bp Feature: domain Description: PinE Location: 91905-92358 bp Feature: domain Description: PinE Location: 91905-92 358 bp Feature: gene Location: 266333-267598 bp Feature: domain Description: umuC Location: 266336-267596 bp Feature: domain Description: umuC Location: 2 66336-2 67596 bp Feature: gene Location: 267601-268020 bp Feature: domain Description: PRK10276 Location: 267604-268015 bp Feature: domain Description: PRK102 76 Location: 2 67604-2 68015 bp Feature: gene Location: 268099-269583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268501-269191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 68501-2 69191 bp Feature: gene Location: 269592-269759 bp Feature: gene Location: 270040-270186 bp Feature: gene Location: 610530-611879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 610920-611610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61092 0-611610 bp Feature: gene Location: 612296-613348 bp Feature: domain Description: int Location: 612299-613298 bp Feature: domain Description: int Location: 612 2 99-6132 98 bp Feature: gene Location: 613471-614034 bp Feature: domain Description: YbjK Location: 613477-614014 bp Feature: domain Description: YbjK Location: 613477-614014 bp Feature: gene Location: 1051833-1052150 bp Feature: domain Description: PRK10276 Location: 1051839-1051953 bp Feature: domain Description: PRK102 76 Location: 1051839-1051953 bp Feature: domain Description: PRK10276 Location: 1051980-1052049 bp Feature: domain Description: PRK102 76 Location: 1051980-1052 049 bp Feature: gene Location: 1052198-1052377 bp Feature: gene Location: 1052588-1053310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1052594-1052963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1052 594-1052 963 bp Feature: gene Location: 1053351-1053944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1053750-1053894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1053750-1053894 bp Feature: gene Location: 1054596-1055327 bp Feature: domain Description: Laminin_G_3 Location: 1054917-1055271 bp Feature: domain Description: Laminin_G_3 Location: 1054917-10552 71 bp Feature: gene Location: 1055331-1056380 bp Feature: gene Location: 3668843-3669694 bp Feature: domain Description: dam Location: 3668846-3669617 bp Feature: domain Description: dam Location: 3668846-3669617 bp Feature: gene Location: 3669691-3672075 bp Feature: domain Description: Phage_GPA Location: 3670255-3671221 bp Feature: domain Description: Phage_GPA Location: 36702 55-36712 2 1 bp Feature: gene Location: 3672453-3673919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3672960-3673569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3672 960-3673569 bp Feature: gene Location: 3673956-3674336 bp Feature: gene Location: 3674348-3674581 bp Feature: domain Description: DinI Location: 3674393-3674576 bp Feature: domain Description: DinI Location: 3674393-3674576 bp Feature: gene Location: 3833614-3833853 bp Feature: gene Location: 3833853-3834191 bp Feature: gene Location: 3834288-3834893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3834291-3834501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38342 91-3834501 bp Feature: gene Location: 3834893-3835765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3835292-3835652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38352 92 -3835652 bp Feature: gene Location: 3835774-3835941 bp Feature: gene Location: 3836169-3836426 bp Feature: gene Location: 4281561-4282985 bp Feature: domain Description: SbcB Location: 4281567-4282983 bp Feature: domain Description: SbcB Location: 42 81567-42 82 983 bp Feature: gene Location: 4283160-4284329 bp Feature: domain Description: dacD Location: 4283169-4284324 bp Feature: domain Description: dacD Location: 42 83169-42 8432 4 bp Feature: gene Location: 4284847-4285725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4285249-4285618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 852 49-42 85618 bp Feature: gene Location: 4285852-4286328 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4285909-4286194 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 42 85909-42 86194 bp Feature: gene Location: 4286410-4286883 bp Feature: domain Description: PRK10016 Location: 4286413-4286872 bp Feature: domain Description: PRK10016 Location: 42 86413-42 86872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, PinE (COG1961), int (PHA02601), YbjK (COG3226), Laminin_G_3 (pfam13385), dam (TIGR00571), Phage_GPA (pfam05840), DinI (pfam06183)
SbcB (COG2925), dacD (PRK11397), group_II_RT_mat (TIGR04416), PRK10016 (DNA gyrase inhibitor SbmC)