myRT

myRT report for GCA_003861165.1_ASM386116v1

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Seq: RDAM01000006.1 (80518 bp)
Overview 1 RT 1: 3800-8914 bp 2 RT 2: 77292-79570 bp Neighborhood of RT #1 [3800, 8964] Drf_FH1 Drf_FH1 InsA DDE_Tnp_IS1 RVT-GII RVT-GII PRK10276 umuC Neighborhood of RT #2 [77292, 79570] HTH_Tnp_IS1 RVT-GII Feature: gene Location: 3800-4729 bp Feature: domain Description: Drf_FH1 Location: 3821-4097 bp Feature: domain Description: Drf_FH1 Location: 3821 -4097 bp Feature: domain Description: Drf_FH1 Location: 4226-4610 bp Feature: domain Description: Drf_FH1 Location: 4226-461 0 bp Feature: gene Location: 4979-5674 bp Feature: domain Description: InsA Location: 4982-5252 bp Feature: domain Description: InsA Location: 4982-5252 bp Feature: domain Description: DDE_Tnp_IS1 Location: 5282-5672 bp Feature: domain Description: DDE_Tnp_IS1 Location: 5282-5672 bp Feature: gene Location: 5708-6427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5711-5918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 571 1 -591 8 bp Feature: gene Location: 6408-7181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6690-7068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6690-7068 bp Feature: gene Location: 7454-8137 bp Feature: domain Description: PRK10276 Location: 7757-8120 bp Feature: domain Description: PRK1 0276 Location: 7757-81 20 bp Feature: gene Location: 8137-8964 bp Feature: domain Description: umuC Location: 8140-8914 bp Feature: domain Description: umuC Location: 81 40-891 4 bp Feature: gene Location: 77292-77477 bp Feature: domain Description: HTH_Tnp_IS1 Location: 77313-77433 bp Feature: domain Description: HTH_Tnp_IS1 Location: 7731 3-77433 bp Feature: gene Location: 77701-78198 bp Feature: gene Location: 78325-78900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78424-78793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78424-78793 bp Feature: gene Location: 78939-79196 bp Feature: gene Location: 79403-79570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Drf_FH1 (pfam06346), InsA (COG3677), DDE_Tnp_IS1 (pfam03400), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), HTH_Tnp_IS1 (pfam12759)

Seq: RDAM01000001.1 (5427621 bp)
Overview 1 RT 1: 853439-858308 bp 2 RT 2: 1306405-1308972 bp 3 RT 3: 4077498-4083895 bp 4 RT 4: 4522435-4524992 bp 5 RT 5: 4909711-4913161 bp Neighborhood of RT #1 [853439, 858313] YccC PRK10016 RVT-GII RVT-GII dacD Neighborhood of RT #2 [1306405, 1308972] RVT-GII RVT-GII Neighborhood of RT #3 [4077498, 4083996] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #4 [4522435, 4525384] int RVT-GII Neighborhood of RT #5 [4909711, 4913163] RVT-GII RVT-GII PRK10276 umuC Feature: gene Location: 853439-854497 bp Feature: domain Description: YccC Location: 853445-854483 bp Feature: domain Description: YccC Location: 853445-854483 bp Feature: gene Location: 854596-855069 bp Feature: domain Description: PRK10016 Location: 854599-855058 bp Feature: domain Description: PRK10016 Location: 854599-855058 bp Feature: gene Location: 855268-855750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 855271-855481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8552 71-855481 bp Feature: gene Location: 855750-856481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 856005-856374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 856005-856374 bp Feature: gene Location: 856624-856836 bp Feature: gene Location: 857144-858313 bp Feature: domain Description: dacD Location: 857153-858308 bp Feature: domain Description: dacD Location: 857153-858308 bp Feature: gene Location: 1306405-1306662 bp Feature: gene Location: 1307063-1307326 bp Feature: gene Location: 1306963-1307658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1307464-1307608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1307464-1307608 bp Feature: gene Location: 1307807-1308190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1307831-1308074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1307831-1308074 bp Feature: gene Location: 1308214-1308576 bp Feature: gene Location: 1308634-1308972 bp Feature: gene Location: 4077498-4080485 bp Feature: gene Location: 4080489-4081220 bp Feature: domain Description: Laminin_G_3 Location: 4080810-4081164 bp Feature: domain Description: Laminin_G_3 Location: 4080810-4081164 bp Feature: gene Location: 4081776-4083362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4082283-4082970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4082 2 83-4082 970 bp Feature: gene Location: 4083452-4083631 bp Feature: gene Location: 4083679-4083996 bp Feature: domain Description: PRK10276 Location: 4083685-4083799 bp Feature: domain Description: PRK102 76 Location: 4083685-4083799 bp Feature: domain Description: PRK10276 Location: 4083826-4083895 bp Feature: domain Description: PRK102 76 Location: 408382 6-4083895 bp Feature: gene Location: 4522435-4523487 bp Feature: domain Description: int Location: 4522438-4523437 bp Feature: domain Description: int Location: 452 2 438-452 3437 bp Feature: gene Location: 4523694-4524164 bp Feature: gene Location: 4524203-4525384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4524302-4524992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452 4302 -452 4992 bp Feature: gene Location: 4909711-4909923 bp Feature: gene Location: 4909820-4910179 bp Feature: gene Location: 4910218-4910793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4910317-4910686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4910317-4910686 bp Feature: gene Location: 4910793-4911479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4910796-4911006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4910796-4911006 bp Feature: gene Location: 4911476-4911895 bp Feature: domain Description: PRK10276 Location: 4911479-4911890 bp Feature: domain Description: PRK102 76 Location: 4911479-4911890 bp Feature: gene Location: 4911898-4913163 bp Feature: domain Description: umuC Location: 4911901-4913161 bp Feature: domain Description: umuC Location: 4911901-4913161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), Laminin_G_3 (pfam13385), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), int (PHA02601), umuC (PRK03609)

Seq: RDAM01000005.1 (45264 bp)
Overview 1 RT 1: 24309-27032 bp Neighborhood of RT #1 [24309, 27049] InsA RVT-GII PRK10276 Feature: gene Location: 24309-24584 bp Feature: domain Description: InsA Location: 24312-24576 bp Feature: domain Description: InsA Location: 243 12-24576 bp Feature: gene Location: 25012-25236 bp Feature: gene Location: 25336-25929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25453-25822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25453 -25822 bp Feature: gene Location: 25950-26342 bp Feature: gene Location: 26426-27049 bp Feature: domain Description: PRK10276 Location: 26669-27032 bp Feature: domain Description: PRK10276 Location: 26669-2703 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: RDAM01000003.1 (231615 bp)
Overview 1 RT 1: 150083-153896 bp Neighborhood of RT #1 [150083, 153896] umuC PRK10276 RVT-GII Feature: gene Location: 150083-151354 bp Feature: domain Description: umuC Location: 150086-151346 bp Feature: domain Description: umuC Location: 150086-15134 6 bp Feature: gene Location: 151354-151776 bp Feature: domain Description: PRK10276 Location: 151360-151762 bp Feature: domain Description: PRK10276 Location: 151360-151762 bp Feature: gene Location: 151862-153349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152267-152957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152267-152957 bp Feature: gene Location: 153400-153633 bp Feature: gene Location: 153750-153896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: RDAM01000002.1 (244734 bp)
Overview 1 RT 1: 164440-167240 bp 2 RT 2: 186069-190448 bp Neighborhood of RT #1 [164440, 167240] RVT-GII RVT-GII Neighborhood of RT #2 [186069, 190450] PRK10276 RVT-GII RVT-GII BetT DDE_Tnp_IS1 Feature: gene Location: 164440-164661 bp Feature: gene Location: 164923-165153 bp Feature: gene Location: 165387-165992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165390-165600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165 390-165 600 bp Feature: gene Location: 165992-166585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 166109-166478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 166109-166478 bp Feature: gene Location: 166606-166971 bp Feature: gene Location: 167025-167240 bp Feature: gene Location: 186069-186494 bp Feature: domain Description: PRK10276 Location: 186072-186480 bp Feature: domain Description: PRK10276 Location: 186072-186480 bp Feature: gene Location: 186688-186897 bp Feature: gene Location: 186968-187771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187295-187664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187295 -187664 bp Feature: gene Location: 187771-188376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187774-187984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187774-187984 bp Feature: gene Location: 188425-189909 bp Feature: domain Description: BetT Location: 188461-189901 bp Feature: domain Description: BetT Location: 188461-189901 bp Feature: gene Location: 190055-190450 bp Feature: domain Description: DDE_Tnp_IS1 Location: 190061-190448 bp Feature: domain Description: DDE_Tnp_IS1 Location: 190061-190448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), BetT (COG1292), DDE_Tnp_IS1 (pfam03400)