myRT

myRT report for GCA_003861175.1_ASM386117v1

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Seq: RDAK01000005.1 (5327860 bp)
Overview 1 RT 1: 188568-192417 bp 2 RT 2: 532768-535672 bp 3 RT 3: 901866-905310 bp 4 RT 4: 4128786-4135248 bp Neighborhood of RT #1 [188568, 192417] umuC PRK10276 RVT-GII Neighborhood of RT #2 [532768, 535722] RVT-GII RVT-GII int Neighborhood of RT #3 [901866, 905366] PRK10276 PRK10276 RVT-GII Laminin_G_3 Neighborhood of RT #4 [4128786, 4135262] SbcB dacD RVT-GII RVT-GII PRK10016 YccC Feature: gene Location: 188568-189833 bp Feature: domain Description: umuC Location: 188571-189831 bp Feature: domain Description: umuC Location: 1 88571 -1 89831 bp Feature: gene Location: 189836-190255 bp Feature: domain Description: PRK10276 Location: 189839-190250 bp Feature: domain Description: PRK1 0276 Location: 1 89839-1 90250 bp Feature: gene Location: 190334-191515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190433-191123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 90433-1 91 1 23 bp Feature: gene Location: 191785-192186 bp Feature: gene Location: 192271-192417 bp Feature: gene Location: 532768-533373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532771-532981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532771 -532981 bp Feature: gene Location: 533373-534251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 533775-534144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 533775-5341 44 bp Feature: gene Location: 534260-534427 bp Feature: gene Location: 534670-535722 bp Feature: domain Description: int Location: 534673-535672 bp Feature: domain Description: int Location: 534673-535672 bp Feature: gene Location: 901866-902183 bp Feature: domain Description: PRK10276 Location: 901872-901986 bp Feature: domain Description: PRK1 0276 Location: 901 872-901 986 bp Feature: domain Description: PRK10276 Location: 902013-902082 bp Feature: domain Description: PRK1 0276 Location: 90201 3-902082 bp Feature: gene Location: 902231-902410 bp Feature: gene Location: 902500-903771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 902689-903379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 902689-903379 bp Feature: gene Location: 903976-904188 bp Feature: gene Location: 904635-905366 bp Feature: domain Description: Laminin_G_3 Location: 904956-905310 bp Feature: domain Description: Laminin_G_3 Location: 904956-90531 0 bp Feature: gene Location: 4128786-4130210 bp Feature: domain Description: SbcB Location: 4128792-4130208 bp Feature: domain Description: SbcB Location: 41 28792-41 30208 bp Feature: gene Location: 4130385-4131554 bp Feature: domain Description: dacD Location: 4130394-4131549 bp Feature: domain Description: dacD Location: 41 30394-41 31 549 bp Feature: gene Location: 4132189-4132947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4132471-4132840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 32471 -41 32840 bp Feature: gene Location: 4132947-4133723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4132950-4133160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 32950-41 331 60 bp Feature: gene Location: 4133632-4134105 bp Feature: domain Description: PRK10016 Location: 4133635-4134094 bp Feature: domain Description: PRK1 001 6 Location: 41 33635-41 34094 bp Feature: gene Location: 4134189-4135262 bp Feature: domain Description: YccC Location: 4134210-4135248 bp Feature: domain Description: YccC Location: 41 3421 0-41 35248 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, int (PHA02601), Laminin_G_3 (pfam13385), SbcB (COG2925), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289)

Seq: RDAK01000007.1 (44627 bp)
Overview 1 RT 1: 2-2544 bp Neighborhood of RT #1 [2, 2544] RVT-GII Feature: gene Location: 2-595 bp Feature: gene Location: 468-1466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 624-1203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 4-12 03 bp Feature: gene Location: 1798-2067 bp Feature: gene Location: 2236-2544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RDAK01000008.1 (240336 bp)
Overview 1 RT 1: 207571-210687 bp Neighborhood of RT #1 [207571, 210687] PRK10276 RVT-GII Feature: gene Location: 207571-207996 bp Feature: domain Description: PRK10276 Location: 207574-207982 bp Feature: domain Description: PRK10276 Location: 207574-207982 bp Feature: gene Location: 208190-208666 bp Feature: gene Location: 208687-209886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208804-209494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208804-209494 bp Feature: gene Location: 210120-210350 bp Feature: gene Location: 210409-210687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: RDAK01000001.1 (325538 bp)
Overview 1 RT 1: 51846-56123 bp 2 RT 2: 119172-122021 bp 3 RT 3: 151974-155203 bp 4 RT 4: 248617-252455 bp Neighborhood of RT #1 [51846, 56123] HTH_28 rve RVT-GII Neighborhood of RT #2 [119172, 122021] PRK10276 RVT-GII Neighborhood of RT #3 [151974, 155203] RVT-GII Neighborhood of RT #4 [248617, 252475] INT_Cre_C RVT-GII RVT-GII HHA Feature: gene Location: 51846-53249 bp Feature: domain Description: HTH_28 Location: 51894-52035 bp Feature: domain Description: HTH_28 Location: 51894 -52035 bp Feature: domain Description: rve Location: 52275-52641 bp Feature: domain Description: rve Location: 52275-5264 1 bp Feature: gene Location: 53517-53768 bp Feature: gene Location: 53883-55247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54165-54855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54 165-54 855 bp Feature: gene Location: 55360-55674 bp Feature: gene Location: 55683-56123 bp Feature: gene Location: 119172-119594 bp Feature: domain Description: PRK10276 Location: 119178-119580 bp Feature: domain Description: PRK10276 Location: 119178-119580 bp Feature: gene Location: 119614-119763 bp Feature: gene Location: 119800-121263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120301-120913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120301-120913 bp Feature: gene Location: 121317-121571 bp Feature: gene Location: 121761-122021 bp Feature: gene Location: 151974-152264 bp Feature: gene Location: 152435-152596 bp Feature: gene Location: 152839-154317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153235-153925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153235-153925 bp Feature: gene Location: 154372-154566 bp Feature: gene Location: 154826-155203 bp Feature: gene Location: 248617-248934 bp Feature: gene Location: 249000-250136 bp Feature: domain Description: INT_Cre_C Location: 249423-250077 bp Feature: domain Description: INT_Cre_C Location: 24 94 23-250077 bp Feature: gene Location: 250222-250827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250225-250435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250225-2504 35 bp Feature: gene Location: 250827-251708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251232-251601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251232-251601 bp Feature: gene Location: 251714-251881 bp Feature: gene Location: 252224-252475 bp Feature: domain Description: HHA Location: 252272-252455 bp Feature: domain Description: HHA Location: 252272-2524 55 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_28 (pfam13518), rve (pfam00665), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), INT_Cre_C (cd00799), HHA (pfam05321)