myRT

myRT report for GCA_003861225.1_ASM386122v1

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Seq: RDAG01000002.1 (227047 bp)
Overview 1 RT 1: 37493-40897 bp 2 RT 2: 67496-70876 bp 3 RT 3: 129493-132699 bp Neighborhood of RT #1 [37493, 41055] YkfC RVT-GII GIIM Tra5 Neighborhood of RT #2 [67496, 70876] PHA02517 RVT-GII GIIM RVT-GII Neighborhood of RT #3 [129493, 132699] PRK10276 RVT-GII Feature: gene Location: 37493-37786 bp Feature: gene Location: 38417-38767 bp Feature: domain Description: YkfC Location: 38426-38729 bp Feature: domain Description: YkfC Location: 38426-38729 bp Feature: gene Location: 38767-39942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38770-39424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38770-39424 bp Feature: domain Description: GIIM Note: maturase Location: 39499-39697 bp Feature: domain Description: GIIM Note: maturase Location: 39499-39697 bp Feature: gene Location: 40029-40214 bp Feature: gene Location: 40366-41055 bp Feature: domain Description: Tra5 Location: 40471-40897 bp Feature: domain Description: Tra5 Location: 40471 -40897 bp Feature: gene Location: 67496-67702 bp Feature: gene Location: 67877-68281 bp Feature: domain Description: PHA02517 Location: 67880-68270 bp Feature: domain Description: PHA0251 7 Location: 67880-68270 bp Feature: gene Location: 68435-69040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68450-68522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68450-68522 bp Feature: domain Description: GIIM Note: maturase Location: 68597-68816 bp Feature: domain Description: GIIM Note: maturase Location: 68597-6881 6 bp Feature: gene Location: 69102-69953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69375-69831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69375-69831 bp Feature: gene Location: 70246-70683 bp Feature: gene Location: 70670-70876 bp Feature: gene Location: 129493-129918 bp Feature: domain Description: PRK10276 Location: 129496-129904 bp Feature: domain Description: PRK1 0276 Location: 1 29496-1 29904 bp Feature: gene Location: 130036-130269 bp Feature: gene Location: 130320-131855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130725-131463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 30725-1 31 463 bp Feature: gene Location: 131970-132317 bp Feature: gene Location: 132376-132699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YkfC (COG3344), RVT-GII, GIIM (pfam08388), Tra5 (COG2801), PHA02517 (putative transposase OrfB; Reviewed), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: RDAG01000001.1 (5553839 bp)
Overview 1 RT 1: 35657-38395 bp 2 RT 2: 48674-52606 bp 3 RT 3: 1583974-1589144 bp Neighborhood of RT #1 [35657, 38395] YkfC RVT-GII group_II_RT_mat Neighborhood of RT #2 [48674, 52606] umuC PRK10276 RVT-GII group_II_RT_mat Neighborhood of RT #3 [1583974, 1589155] Integrase_1 RVT-UG4 FimD FimD Feature: gene Location: 35657-35950 bp Feature: gene Location: 36578-36739 bp Feature: domain Description: YkfC Location: 36587-36722 bp Feature: domain Description: YkfC Location: 36587-3672 2 bp Feature: gene Location: 36799-37515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36892-37315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36892 -37315 bp Feature: gene Location: 37530-38102 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 37536-37848 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 37536-37848 bp Feature: gene Location: 38189-38395 bp Feature: gene Location: 48674-49945 bp Feature: domain Description: umuC Location: 48677-49937 bp Feature: domain Description: umuC Location: 48677-49937 bp Feature: gene Location: 49945-50628 bp Feature: domain Description: PRK10276 Location: 50248-50611 bp Feature: domain Description: PRK102 76 Location: 502 48-50611 bp Feature: gene Location: 50782-51792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51187-51757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51187-51757 bp Feature: gene Location: 51792-52268 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 51849-52134 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 51849-52 134 bp Feature: gene Location: 52337-52606 bp Feature: gene Location: 1583974-1584414 bp Feature: domain Description: Integrase_1 Location: 1583980-1584196 bp Feature: domain Description: Integrase_1 Location: 1583980-1584196 bp Feature: gene Location: 1584429-1584665 bp Feature: gene Location: 1584703-1586547 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1585111-1585555 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1585111-1585555 bp Feature: gene Location: 1586547-1587023 bp Feature: domain Description: FimD Location: 1586559-1587012 bp Feature: domain Description: FimD Location: 1586559-1587012 bp Feature: gene Location: 1587020-1589155 bp Feature: domain Description: FimD Location: 1587077-1589144 bp Feature: domain Description: FimD Location: 1587077-1589144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YkfC (COG3344), RVT-GII, group_II_RT_mat (TIGR04416), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188)