myRT

myRT report for GCA_003861305.1_ASM386130v1

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Seq: RCZT01000001.1 (4014762 bp)
Overview 1 RT 1: 6691-9657 bp 2 RT 2: 83941-88877 bp 3 RT 3: 268470-272314 bp 4 RT 4: 604771-608206 bp 5 RT 5: 3633458-3636531 bp 6 RT 6: 3985853-3991241 bp Neighborhood of RT #1 [6691, 9657] PRK10597 RVT-GII Neighborhood of RT #2 [83941, 88885] umuC PRK10276 RVT-GII PinE Neighborhood of RT #3 [268470, 272314] umuC PRK10276 RVT-GII Neighborhood of RT #4 [604771, 608256] DinI RVT-GII RVT-GII int Neighborhood of RT #5 [3633458, 3636536] PRK09678 RVT-UG11 SmpB PRK10724 Neighborhood of RT #6 [3985853, 3991297] RVT-GII RVT-GII Cloacin E2R135 Cytotoxic Rve Feature: gene Location: 6691-6939 bp Feature: domain Description: PRK10597 Location: 6694-6934 bp Feature: domain Description: PRK1 0597 Location: 6694-6934 bp Feature: gene Location: 7325-7579 bp Feature: gene Location: 7639-8700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7744-8335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7744-8335 bp Feature: gene Location: 8996-9208 bp Feature: gene Location: 9448-9657 bp Feature: gene Location: 83941-85002 bp Feature: domain Description: umuC Location: 83944-84982 bp Feature: domain Description: umuC Location: 83944-84982 bp Feature: gene Location: 85004-85627 bp Feature: domain Description: PRK10276 Location: 85211-85622 bp Feature: domain Description: PRK1 0276 Location: 8521 1 -85622 bp Feature: gene Location: 85727-86683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85826-86516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85826-8651 6 bp Feature: gene Location: 86978-87190 bp Feature: gene Location: 88376-88885 bp Feature: domain Description: PinE Location: 88424-88877 bp Feature: domain Description: PinE Location: 88424-88877 bp Feature: gene Location: 268470-269735 bp Feature: domain Description: umuC Location: 268473-269733 bp Feature: domain Description: umuC Location: 268473-269733 bp Feature: gene Location: 269738-270157 bp Feature: domain Description: PRK10276 Location: 269741-270152 bp Feature: domain Description: PRK1 0276 Location: 269741 -2701 52 bp Feature: gene Location: 270135-271571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 270390-271080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 270390-271 080 bp Feature: gene Location: 271597-271887 bp Feature: gene Location: 272168-272314 bp Feature: gene Location: 604771-605004 bp Feature: domain Description: DinI Location: 604813-604999 bp Feature: domain Description: DinI Location: 60481 3-604999 bp Feature: gene Location: 605015-605203 bp Feature: gene Location: 605212-605907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 605215-605425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60521 5-605425 bp Feature: gene Location: 605907-606785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 606309-606681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 606309-606681 bp Feature: gene Location: 606794-606961 bp Feature: gene Location: 607204-608256 bp Feature: domain Description: int Location: 607207-608206 bp Feature: domain Description: int Location: 607207-608206 bp Feature: gene Location: 3633458-3633676 bp Feature: domain Description: PRK09678 Location: 3633461-3633659 bp Feature: domain Description: PRK09678 Location: 3633461 -3633659 bp Feature: gene Location: 3633923-3634111 bp Feature: gene Location: 3634554-3634853 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 3634557-3634668 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 3634557-3634668 bp Feature: gene Location: 3635467-3635949 bp Feature: domain Description: SmpB Location: 3635497-3635941 bp Feature: domain Description: SmpB Location: 3635497-3635941 bp Feature: gene Location: 3636099-3636536 bp Feature: domain Description: PRK10724 Location: 3636102-3636531 bp Feature: domain Description: PRK1 0724 Location: 36361 02-3636531 bp Feature: gene Location: 3985853-3986272 bp Feature: gene Location: 3986978-3987244 bp Feature: gene Location: 3986878-3987858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3987382-3987754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3987382-3987754 bp Feature: gene Location: 3987858-3988463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3987861-3988071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3987861 -3988071 bp Feature: gene Location: 3988582-3990267 bp Feature: domain Description: Cloacin Location: 3988717-3989539 bp Feature: domain Description: Cloacin Location: 398871 7-3989539 bp Feature: domain Description: E2R135 Location: 3989548-3989953 bp Feature: domain Description: E2R1 35 Location: 3989548-3989953 bp Feature: domain Description: Cytotoxic Location: 3990010-3990256 bp Feature: domain Description: Cytotoxic Location: 399001 0-3990256 bp Feature: gene Location: 3990581-3991297 bp Feature: domain Description: Rve Location: 3990596-3991241 bp Feature: domain Description: Rve Location: 3990596-3991 241 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10597 (DNA damage-inducible protein I; Provisional), RVT-GII, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PinE (COG1961), DinI (pfam06183), int (PHA02601), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668)
PRK10724 (type II toxin-antitoxin system RatA family toxin), Cloacin (pfam03515), E2R135 (pfam11570), Cytotoxic (pfam09000), Rve (COG3316)

Seq: RCZT01000002.1 (1449599 bp)
Overview 1 RT 1: 15920-18886 bp Neighborhood of RT #1 [15920, 18891] RVT-GII RVT-GII PRK10597 Feature: gene Location: 15920-16129 bp Feature: gene Location: 16576-16839 bp Feature: gene Location: 16878-17453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16977-17349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16977-17349 bp Feature: gene Location: 17453-17938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17456-17588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17456-17588 bp Feature: gene Location: 17975-18421 bp Feature: gene Location: 18643-18891 bp Feature: domain Description: PRK10597 Location: 18646-18886 bp Feature: domain Description: PRK10597 Location: 18646-18886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10597 (DNA damage-inducible protein I; Provisional)