myRT

myRT report for GCA_003861465.1_ASM386146v1

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Seq: RDAL01000005.1 (36647 bp)
Overview 1 RT 1: 32068-34205 bp Neighborhood of RT #1 [32068, 34205] RVT-GII Feature: gene Location: 32068-32220 bp Feature: gene Location: 32279-32623 bp Feature: gene Location: 32833-33393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33157-33382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 331 57-33382 bp Feature: gene Location: 33475-33639 bp Feature: gene Location: 33951-34205 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RDAL01000006.1 (5372314 bp)
Overview 1 RT 1: 27413-30759 bp 2 RT 2: 3193830-3196391 bp 3 RT 3: 3536805-3540645 bp 4 RT 4: 3714357-3720841 bp 5 RT 5: 4942479-4947790 bp Neighborhood of RT #1 [27413, 30759] Terminase_2 PRK10276 RVT-GII Neighborhood of RT #2 [3193830, 3196783] int RVT-GII Neighborhood of RT #3 [3536805, 3540647] RVT-GII RVT-GII PRK10276 umuC umuC Neighborhood of RT #4 [3714357, 3720846] PinE RVT-GII PRK10276 umuC PRK09951 Neighborhood of RT #5 [4942479, 4947792] PRK10016 RVT-GII RVT-GII dacD SbcB Feature: gene Location: 27413-28105 bp Feature: domain Description: Terminase_2 Location: 27536-27968 bp Feature: domain Description: Terminase_2 Location: 2 7536-2 7968 bp Feature: gene Location: 28114-28443 bp Feature: domain Description: PRK10276 Location: 28120-28261 bp Feature: domain Description: PRK102 76 Location: 2 812 0-2 82 61 bp Feature: gene Location: 28641-29855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28896-29490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8896-2 9490 bp Feature: gene Location: 29997-30209 bp Feature: gene Location: 30421-30759 bp Feature: gene Location: 3193830-3194882 bp Feature: domain Description: int Location: 3193833-3194832 bp Feature: domain Description: int Location: 3193833-3194832 bp Feature: gene Location: 3195089-3195301 bp Feature: gene Location: 3195419-3196783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3195701-3196391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3195701-3196391 bp Feature: gene Location: 3536805-3536951 bp Feature: gene Location: 3537405-3537668 bp Feature: gene Location: 3537305-3538282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3537806-3538175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3537806-3538175 bp Feature: gene Location: 3538282-3538884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3538285-3538492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35382 85-3538492 bp Feature: gene Location: 3538963-3540276 bp Feature: domain Description: PRK10276 Location: 3538966-3539281 bp Feature: domain Description: PRK102 76 Location: 3538966-35392 81 bp Feature: domain Description: umuC Location: 3539386-3540118 bp Feature: domain Description: umuC Location: 3539386-3540118 bp Feature: gene Location: 3540414-3540647 bp Feature: domain Description: umuC Location: 3540417-3540645 bp Feature: domain Description: umuC Location: 3540417-3540645 bp Feature: gene Location: 3714357-3714866 bp Feature: domain Description: PinE Location: 3714405-3714858 bp Feature: domain Description: PinE Location: 3714405-3714858 bp Feature: gene Location: 3716050-3716199 bp Feature: gene Location: 3716254-3718239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3716659-3717349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3716659-3717349 bp Feature: domain Description: PRK10276 Location: 3717823-3718234 bp Feature: domain Description: PRK102 76 Location: 371782 3-37182 34 bp Feature: gene Location: 3718241-3719506 bp Feature: domain Description: umuC Location: 3718244-3719504 bp Feature: domain Description: umuC Location: 37182 44-3719504 bp Feature: gene Location: 3720595-3720846 bp Feature: domain Description: PRK09951 Location: 3720607-3720841 bp Feature: domain Description: PRK09951 Location: 372 0607-372 0841 bp Feature: gene Location: 4942479-4942826 bp Feature: domain Description: PRK10016 Location: 4942485-4942815 bp Feature: domain Description: PRK10016 Location: 4942 485-4942 815 bp Feature: gene Location: 4942828-4942980 bp Feature: gene Location: 4943029-4943634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4943032-4943242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4943032 -49432 42 bp Feature: gene Location: 4943634-4944392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4943916-4944285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4943916-49442 85 bp Feature: gene Location: 4945025-4946194 bp Feature: domain Description: dacD Location: 4945034-4946189 bp Feature: domain Description: dacD Location: 4945034-4946189 bp Feature: gene Location: 4946368-4947792 bp Feature: domain Description: SbcB Location: 4946374-4947790 bp Feature: domain Description: SbcB Location: 4946374-4947790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Terminase_2 (pfam03592), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, int (PHA02601), umuC (PRK03609), PinE (COG1961), PRK09951 (hypothetical protein; Provisional), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: RDAL01000002.1 (34112 bp)
Overview 1 RT 1: 16576-20163 bp Neighborhood of RT #1 [16576, 20163] PRK10276 RVT-GII DUF2913 Feature: gene Location: 16576-17001 bp Feature: domain Description: PRK10276 Location: 16627-16987 bp Feature: domain Description: PRK10276 Location: 16627-16987 bp Feature: gene Location: 17194-17406 bp Feature: gene Location: 17481-18887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17805-18495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17805-18495 bp Feature: gene Location: 18978-19592 bp Feature: domain Description: DUF2913 Location: 19008-19494 bp Feature: domain Description: DUF2913 Location: 19008-19494 bp Feature: gene Location: 19882-20163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DUF2913 (pfam11140)