myRT

myRT report for GCA_003861475.1_ASM386147v1

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Seq: RDAN01000001.1 (5378838 bp)
Overview 1 RT 1: 410879-417361 bp 2 RT 2: 2788712-2792202 bp 3 RT 3: 4291915-4295761 bp Neighborhood of RT #1 [410879, 417363] YccC PRK10016 RVT-GII RVT-GII dacD SbcB Neighborhood of RT #2 [2788712, 2793008] RVT-UG5 PRK04247 Neighborhood of RT #3 [4291915, 4295763] RVT-GII RVT-GII PRK10276 umuC Feature: gene Location: 410879-411937 bp Feature: domain Description: YccC Location: 410885-411923 bp Feature: domain Description: YccC Location: 41 0885-41 1 923 bp Feature: gene Location: 412036-412509 bp Feature: domain Description: PRK10016 Location: 412039-412498 bp Feature: domain Description: PRK1 001 6 Location: 41 2039-41 2498 bp Feature: gene Location: 412713-413198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 412716-412848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 271 6-41 2848 bp Feature: gene Location: 413198-414286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413810-414182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 381 0-41 41 82 bp Feature: gene Location: 414595-415764 bp Feature: domain Description: dacD Location: 414604-415759 bp Feature: domain Description: dacD Location: 41 4604-41 5759 bp Feature: gene Location: 415939-417363 bp Feature: domain Description: SbcB Location: 415945-417361 bp Feature: domain Description: SbcB Location: 41 5945-41 7361 bp Feature: gene Location: 2788712-2791372 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2788853-2789348 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2788853-2789348 bp Feature: gene Location: 2791372-2791728 bp Feature: gene Location: 2791908-2793008 bp Feature: domain Description: PRK04247 Location: 2791971-2792202 bp Feature: domain Description: PRK04247 Location: 2791 971 -2792202 bp Feature: gene Location: 4291915-4292061 bp Feature: gene Location: 4292512-4292778 bp Feature: gene Location: 4292412-4293392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4292916-4293288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429291 6-4293288 bp Feature: gene Location: 4293392-4293997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4293395-4293605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4293395-4293605 bp Feature: gene Location: 4294076-4294495 bp Feature: domain Description: PRK10276 Location: 4294079-4294490 bp Feature: domain Description: PRK1 0276 Location: 4294079-4294490 bp Feature: gene Location: 4294498-4295763 bp Feature: domain Description: umuC Location: 4294501-4295761 bp Feature: domain Description: umuC Location: 4294501 -4295761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925), RVT-UG5, PRK04247 (endonuclease NucS), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: RDAN01000003.1 (349719 bp)
Overview 1 RT 1: 86931-90675 bp 2 RT 2: 170029-174153 bp 3 RT 3: 298821-302658 bp Neighborhood of RT #1 [86931, 91283] RVT-GII HTH_28 rve Neighborhood of RT #2 [170029, 174153] umuC PRK10276 RVT-GII Neighborhood of RT #3 [298821, 302678] INT_Cre_C RVT-GII HHA Feature: gene Location: 86931-87440 bp Feature: gene Location: 87449-87763 bp Feature: gene Location: 87876-89363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88281-88971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882 81-88971 bp Feature: gene Location: 89388-89798 bp Feature: gene Location: 89880-91283 bp Feature: domain Description: HTH_28 Location: 89928-90069 bp Feature: domain Description: HTH_2 8 Location: 8992 8-90069 bp Feature: domain Description: rve Location: 90309-90675 bp Feature: domain Description: rve Location: 90309-90675 bp Feature: gene Location: 170029-171300 bp Feature: domain Description: umuC Location: 170032-171292 bp Feature: domain Description: umuC Location: 170032 -1712 92 bp Feature: gene Location: 171300-171722 bp Feature: domain Description: PRK10276 Location: 171306-171708 bp Feature: domain Description: PRK102 76 Location: 171306-171708 bp Feature: gene Location: 171808-173394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172312-173002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172 312 -173002 bp Feature: gene Location: 173448-173753 bp Feature: gene Location: 173893-174153 bp Feature: gene Location: 298821-299138 bp Feature: gene Location: 299204-300340 bp Feature: domain Description: INT_Cre_C Location: 299627-300281 bp Feature: domain Description: INT_Cre_C Location: 2 9962 7-3002 81 bp Feature: gene Location: 300426-302039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 300957-301647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 300957-301647 bp Feature: gene Location: 302064-302405 bp Feature: gene Location: 302427-302678 bp Feature: domain Description: HHA Location: 302475-302658 bp Feature: domain Description: HHA Location: 302 475-302 658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_28 (pfam13518), rve (pfam00665), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), INT_Cre_C (cd00799), HHA (pfam05321)