myRT

myRT report for GCA_003865075.1_ASM386507v1

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Seq: BHWB01000009.1 (192831 bp)
Overview 1 RT 1: 838-7199 bp Neighborhood of RT #1 [838, 7228] Relaxase YWFCY RVT_N RVT-GII GIIM TraG-D_C RteC Feature: gene Location: 838-2103 bp Feature: domain Description: Relaxase Location: 892-1393 bp Feature: domain Description: Relaxase Location: 892-1 393 bp Feature: gene Location: 2115-3041 bp Feature: domain Description: YWFCY Location: 2124-2301 bp Feature: domain Description: YWFCY Location: 21 24-2301 bp Feature: gene Location: 3679-5331 bp Feature: domain Description: RVT_N Location: 3733-3976 bp Feature: domain Description: RVT_N Location: 3733-3976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4021-4669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4021 -4669 bp Feature: domain Description: GIIM Note: maturase Location: 4723-4954 bp Feature: domain Description: GIIM Note: maturase Location: 4723-4954 bp Feature: gene Location: 5336-6541 bp Feature: domain Description: TraG-D_C Location: 5918-6248 bp Feature: domain Description: TraG-D_C Location: 591 8-6248 bp Feature: gene Location: 6623-7228 bp Feature: domain Description: RteC Location: 6926-7199 bp Feature: domain Description: RteC Location: 6926-71 99 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: BHWB01000008.1 (269233 bp)
Overview 1 RT 1: 256893-261944 bp Neighborhood of RT #1 [256893, 262153] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-GII Intron_maturas2 COG3943 DUF2971 Feature: gene Location: 256893-258062 bp Feature: domain Description: Arm-DNA-bind_5 Location: 256923-257178 bp Feature: domain Description: Arm-DNA-bind_5 Location: 2 5692 3-2 57178 bp Feature: domain Description: Phage_int_SAM_5 Location: 257217-257538 bp Feature: domain Description: Phage_int_SAM_5 Location: 2 572 17-2 57538 bp Feature: domain Description: INTN1_C_like Location: 257577-258045 bp Feature: domain Description: INTN1_C_like Location: 2 57577-2 58045 bp Feature: gene Location: 258251-258379 bp Feature: gene Location: 258613-260421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258877-259699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 58877-2 59699 bp Feature: domain Description: Intron_maturas2 Location: 259825-260080 bp Feature: domain Description: Intron_maturas2 Location: 2 5982 5-2 60080 bp Feature: gene Location: 260637-260999 bp Feature: domain Description: COG3943 Location: 260676-260928 bp Feature: domain Description: COG3943 Location: 2 60676-2 6092 8 bp Feature: gene Location: 261107-262153 bp Feature: domain Description: DUF2971 Location: 261689-261944 bp Feature: domain Description: DUF2 971 Location: 2 61689-2 61944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: BHWB01000029.1 (34649 bp)
Overview 1 RT 1: 26722-34265 bp Neighborhood of RT #1 [26722, 34648] HTH_ARAC RVT_N RVT-GII GIIM COG4646 Feature: gene Location: 26722-27879 bp Feature: domain Description: HTH_ARAC Location: 27613-27859 bp Feature: domain Description: HTH_ARAC Location: 27613 -27859 bp Feature: gene Location: 28022-29272 bp Feature: gene Location: 29226-30893 bp Feature: domain Description: RVT_N Location: 29280-29523 bp Feature: domain Description: RVT_N Location: 29280-29523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29568-30216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29568-3 0216 bp Feature: domain Description: GIIM Note: maturase Location: 30270-30501 bp Feature: domain Description: GIIM Note: maturase Location: 3 0270-3 0501 bp Feature: gene Location: 30875-31189 bp Feature: gene Location: 31550-34648 bp Feature: domain Description: COG4646 Location: 32252-34265 bp Feature: domain Description: COG4646 Location: 3 2252-3 4265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: BHWB01000033.1 (27001 bp)
Overview 1 RT 1: 8842-12936 bp Neighborhood of RT #1 [8842, 12995] Bac_Flav_CT_J RVT-GII Intron_maturas2 HNHc DUF4141 Feature: gene Location: 8842-9855 bp Feature: domain Description: Bac_Flav_CT_J Location: 8863-9826 bp Feature: domain Description: Bac_Flav_CT_J Location: 8863-9826 bp Feature: gene Location: 9883-10419 bp Feature: gene Location: 10412-12247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10706-11528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10706-11528 bp Feature: domain Description: Intron_maturas2 Location: 11687-12056 bp Feature: domain Description: Intron_maturas2 Location: 11687-12056 bp Feature: domain Description: HNHc Note: nucleases Location: 12080-12221 bp Feature: domain Description: HNHc Note: nucleases Location: 12080-12221 bp Feature: gene Location: 12567-12728 bp Feature: gene Location: 12768-12995 bp Feature: domain Description: DUF4141 Location: 12783-12936 bp Feature: domain Description: DUF4 14 1 Location: 12783-12936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: BHWB01000014.1 (118883 bp)
Overview 1 RT 1: 110874-112417 bp Neighborhood of RT #1 [110874, 112417] RVT-GII HTH_28 Feature: gene Location: 110874-111236 bp Feature: gene Location: 111240-111449 bp Feature: gene Location: 111479-111676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111482-111674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111482-111674 bp Feature: gene Location: 111797-112087 bp Feature: domain Description: HTH_28 Location: 111821-111965 bp Feature: domain Description: HTH_28 Location: 111821-111965 bp Feature: gene Location: 112265-112417 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: BHWB01000004.1 (420949 bp)
Overview 1 RT 1: 346756-350786 bp 2 RT 2: 373997-381919 bp Neighborhood of RT #1 [346756, 350786] Bac_Flav_CT_J RVT-GII Intron_maturas2 HNHc Neighborhood of RT #2 [373997, 382302] Spc7 RVT_N RVT-GII GIIM N6_Mtase COG4646 Feature: gene Location: 346756-347760 bp Feature: domain Description: Bac_Flav_CT_J Location: 346765-347731 bp Feature: domain Description: Bac_Flav_CT_J Location: 346 76 5-347731 bp Feature: gene Location: 347764-348300 bp Feature: gene Location: 348293-350128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348587-349409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348587-349409 bp Feature: domain Description: Intron_maturas2 Location: 349568-349937 bp Feature: domain Description: Intron_maturas2 Location: 34956 8-349937 bp Feature: domain Description: HNHc Note: nucleases Location: 349961-350102 bp Feature: domain Description: HNHc Note: nucleases Location: 34996 1-350102 bp Feature: gene Location: 350448-350609 bp Feature: gene Location: 350601-350786 bp Feature: gene Location: 373997-374896 bp Feature: domain Description: Spc7 Location: 374507-374774 bp Feature: domain Description: Spc7 Location: 374507-374774 bp Feature: gene Location: 374911-375309 bp Feature: gene Location: 375263-376930 bp Feature: domain Description: RVT_N Location: 375317-375560 bp Feature: domain Description: RVT_N Location: 375317-37556 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375605-376253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3756 05-376 253 bp Feature: domain Description: GIIM Note: maturase Location: 376307-376538 bp Feature: domain Description: GIIM Note: maturase Location: 376 307-376 538 bp Feature: gene Location: 376945-377226 bp Feature: gene Location: 377587-382302 bp Feature: domain Description: N6_Mtase Location: 377899-378499 bp Feature: domain Description: N6 _Mtase Location: 377899-378499 bp Feature: domain Description: COG4646 Location: 379909-381919 bp Feature: domain Description: COG46 46 Location: 379909-381919 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: BHWB01000005.1 (369744 bp)
Overview 1 RT 1: 115528-123469 bp 2 RT 2: 331847-337209 bp Neighborhood of RT #1 [115528, 123483] SMC_prok_B Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Bac_Flav_CT_G Neighborhood of RT #2 [331847, 337223] DUF4141 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Feature: gene Location: 115528-118068 bp Feature: domain Description: SMC_prok_B Location: 117076-117388 bp Feature: domain Description: SMC_prok_B Location: 117 07 6-117 388 bp Feature: gene Location: 118289-118834 bp Feature: domain Description: Bac_Flav_CT_G Location: 118307-118721 bp Feature: domain Description: Bac_Flav_CT_G Location: 118307 -1187 21 bp Feature: gene Location: 118912-120723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119176-119998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11917 6-119998 bp Feature: domain Description: Intron_maturas2 Location: 120073-120388 bp Feature: domain Description: Intron_maturas2 Location: 12007 3-120388 bp Feature: domain Description: HNHc Note: nucleases Location: 120544-120694 bp Feature: domain Description: HNHc Note: nucleases Location: 120544-120694 bp Feature: gene Location: 121069-121242 bp Feature: gene Location: 121270-123483 bp Feature: domain Description: Bac_Flav_CT_G Location: 121420-122929 bp Feature: domain Description: Bac_Flav_CT_G Location: 121420-122929 bp Feature: domain Description: Bac_Flav_CT_G Location: 123001-123469 bp Feature: domain Description: Bac_Flav_CT_G Location: 123001-123469 bp Feature: gene Location: 331847-332479 bp Feature: domain Description: DUF4141 Location: 331871-332018 bp Feature: domain Description: DUF4141 Location: 33187 1-332018 bp Feature: gene Location: 332500-332958 bp Feature: domain Description: Bac_Flav_CT_G Location: 332518-332944 bp Feature: domain Description: Bac_Flav_CT_G Location: 332518-332944 bp Feature: gene Location: 333036-334847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 333300-334122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 333300-334122 bp Feature: domain Description: Intron_maturas2 Location: 334197-334512 bp Feature: domain Description: Intron_maturas2 Location: 334197 -334512 bp Feature: domain Description: HNHc Note: nucleases Location: 334668-334818 bp Feature: domain Description: HNHc Note: nucleases Location: 334668-334818 bp Feature: gene Location: 335193-335366 bp Feature: gene Location: 335394-337223 bp Feature: domain Description: Bac_Flav_CT_G Location: 335397-337209 bp Feature: domain Description: Bac_Flav_CT_G Location: 335397 -337 209 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT