myRT

myRT report for GCA_003865405.1_ASM386540v1

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Seq: RQVQ01000070.1 (7611 bp)
Overview 1 RT 1: 29-7173 bp Neighborhood of RT #1 [29, 7173] PRK14975 RVT-UG9 Feature: gene Location: 29-748 bp Feature: gene Location: 789-2339 bp Feature: domain Description: PRK14975 Location: 1482-2262 bp Feature: domain Description: PRK1 4975 Location: 1 482-2262 bp Feature: gene Location: 2342-4834 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 3344-4001 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 3344-4001 bp Feature: gene Location: 5886-6584 bp Feature: gene Location: 6646-7173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional), RVT-UG9

Seq: RQVQ01000064.1 (8703 bp)
Overview 1 RT 1: 1-2445 bp Neighborhood of RT #1 [1, 2445] RVT-GII AcrR Feature: gene Location: 1-318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 196-319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 196-319 bp Feature: gene Location: 1394-1984 bp Feature: domain Description: AcrR Location: 1415-1778 bp Feature: domain Description: AcrR Location: 1415-1778 bp Feature: gene Location: 1987-2445 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, AcrR (COG1309)

Seq: RQVQ01000033.1 (33308 bp)
Overview 1 RT 1: 8810-15100 bp Neighborhood of RT #1 [8810, 15105] DUF4141 Bac_Flav_CT_G RVT-GII group_II_RT_mat HNHc Bac_Flav_CT_G DUF4134 Feature: gene Location: 8810-9442 bp Feature: domain Description: DUF4141 Location: 8825-8981 bp Feature: domain Description: DUF4141 Location: 8825-8981 bp Feature: gene Location: 9471-9956 bp Feature: domain Description: Bac_Flav_CT_G Location: 9507-9933 bp Feature: domain Description: Bac_Flav_CT_G Location: 9507-993 3 bp Feature: gene Location: 10016-11827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10280-11102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10280-11102 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 11312-11432 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 113 12-1143 2 bp Feature: domain Description: HNHc Note: nucleases Location: 11645-11801 bp Feature: domain Description: HNHc Note: nucleases Location: 11645-11801 bp Feature: gene Location: 12372-14462 bp Feature: domain Description: Bac_Flav_CT_G Location: 12375-14451 bp Feature: domain Description: Bac_Flav_CT_G Location: 123 75-14451 bp Feature: gene Location: 14800-15105 bp Feature: domain Description: DUF4134 Location: 14827-15100 bp Feature: domain Description: DUF413 4 Location: 14827-15100 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4141 (pfam13605), Bac_Flav_CT_G (TIGR03783), RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507), DUF4134 (pfam13572)